DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15056 and fbxl5

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001288257.1 Gene:fbxl5 / 322181 ZFINID:ZDB-GENE-030131-900 Length:679 Species:Danio rerio


Alignment Length:283 Identity:53/283 - (18%)
Similarity:101/283 - (35%) Gaps:91/283 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GPHTPMFSHFEDFIRLMSIRLTKVNEIALEGFQLTQYKWFNAPETSFSNLTYVSLRRCQLNDENL 148
            |||..|    :..:.|.|.:|:                     .|:|||                
Zfish    13 GPHWRM----KQLVGLYSEKLS---------------------NTNFSN---------------- 36

  Fly   149 VGWEFLTHLETL-----DLRYNDRLTGSCLMSL----------------PTSLLSLYITGCRNLC 192
             ..:|.:.|::|     :.:.::::...|:|.|                .:.:|:|:..|.|::.
Zfish    37 -NRDFRSFLQSLLDTFTEFKKHEQIENECIMELLQERSHTVYHVHADNKLSDMLTLFQKGLRSVT 100

  Fly   193 P--NQLIFLNRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYRLGELRYL 255
            .  .||.:..::....|....|.:|    |:..:..:..|:|:           :.:...||:.:
Zfish   101 SEFEQLNYAQQLKERLEAFTQDFIP----HMKEEEEVYQPMLM-----------EYFSYEELKAI 150

  Fly   256 QSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNL-MFSDAPSGFVSANALSIISRFRQLRVLKMP 319
            :..|:..|.:...:...||...:       |:.| ::|.|.  ...|...|...:..:.|||:..
Zfish   151 KQQVMLQHCSSQCQSSCSDTHTL-------LKGLSLWSHAE--LQKAFKYSDHEKTGEERVLERV 206

  Fly   320 NQPYRPNDLLRLRNLTFLETLDL 342
            :....|.:|| ||...||...||
Zfish   207 SVSSLPQELL-LRIFRFLGPQDL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 1/22 (5%)
leucine-rich repeat 157..179 CDD:275381 5/42 (12%)
leucine-rich repeat 180..204 CDD:275381 6/25 (24%)
leucine-rich repeat 205..231 CDD:275381 4/25 (16%)
leucine-rich repeat 232..285 CDD:275381 7/52 (13%)
leucine-rich repeat 286..326 CDD:275381 9/40 (23%)
AMN1 306..>376 CDD:187754 12/37 (32%)
leucine-rich repeat 337..362 CDD:275381 3/6 (50%)
fbxl5NP_001288257.1 Hemerythrin-like. /evidence=ECO:0000250|UniProtKB:Q9UKA1 1..159 32/202 (16%)
Hr_FBXL5 7..155 CDD:213984 31/198 (16%)
F-box_FBXL5 208..248 CDD:438890 9/22 (41%)
AMN1 313..>410 CDD:187754
LRR 1 316..342
leucine-rich repeat 335..360 CDD:275381
LRR 2 343..367
leucine-rich repeat 361..387 CDD:275381
LRR 3 368..395
leucine-rich repeat 388..422 CDD:275381
LRR 4 396..426
leucine-rich repeat 423..447 CDD:275381
leucine-rich repeat 510..574 CDD:275381
LRR 5 565..595
AMN1 566..>644 CDD:187754
leucine-rich repeat 588..615 CDD:275381
LRR 6 596..623
leucine-rich repeat 616..641 CDD:275381
LRR 7 624..649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.