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Protein Alignment CG15056 and Skp2

DIOPT Version :10

Sequence 1:	NP_573291.1	Gene:	CG15056 / 32824	FlyBaseID:	FBgn0030918	Length:	399	Species:	Drosophila melanogaster
Sequence 2:	NP_001099886.1	Gene:	Skp2 / 294790	RGDID:	1562456	Length:	423	Species:	Rattus norvegicus

Alignment Length:	207	Identity:	46/207 - (22%)
Similarity:	85/207 - (41%)	Gaps:	52/207 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   105 TKVNEIALEGFQLTQYKWFNAPETSF----SNLTYVSLRRCQLNDENLVG--WEFLTHLETLDLR 163
            :|:..::|||.||:.      |..:.    .||..::|..|....|:.|.  ....:.|:.|:|.
  Rat   206 SKLQNLSLEGLQLSD------PIVTTLAQNENLVRLNLCGCSGFSESAVATLLSSCSRLDELNLS 264

  Fly   164 ----YNDRLTGSCLMSLPTSLLSLYITGCRNLCPNQLIFLNRIPRLRELRASDLMPGGHWHIYRD 224
                :.::...:.:..||.:|..|.::|.|                :.|:.:||.         .
  Rat   265 WCFDFTEKHVQAAVAHLPDTLTQLNLSGYR----------------KNLQKTDLC---------T 304

  Fly   225 LVLACPLLVMVEISICSLNRDEY--RLGELRYLQSLVIKAHSTDTIRC-KVSDWMLISLLDVPFL 286
            |:..||.||.:::|...:.:::.  ...:|.|||.|.:.       || .:....|:.|.::|.|
  Rat   305 LIKRCPNLVRLDLSDSIMLKNDCFPEFFQLNYLQHLSLS-------RCYDIIPETLLELGEIPTL 362

  Fly   287 RNL-MFSDAPSG 297
            :.| :|...|.|
  Rat   363 KTLQVFGIVPDG 374

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.