DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and si:ch73-173p19.1

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_002660968.3 Gene:si:ch73-173p19.1 / 100332407 ZFINID:ZDB-GENE-130530-952 Length:918 Species:Danio rerio


Alignment Length:300 Identity:69/300 - (23%)
Similarity:115/300 - (38%) Gaps:83/300 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SFSNLTYVS-LRRCQLNDENLVGWEFLTHLETLDLRYNDRLTGSCLMSLPTSLLSLYITGCRNLC 192
            :|:.|.::| |....:.|..|.....|:.|:.|:|....:||.|||.         :|||.|:  
Zfish   541 AFTCLKHLSFLNSPLITDAGLSVLSNLSKLQHLNLSSCSKLTDSCLQ---------HITGLRS-- 594

  Fly   193 PNQLIFLNRIPRLRELRASD------LMPGGH-------------WHIYRDLVLACPLLVMVEIS 238
               |.||    .|.:.:.||      |..|..             ....|.|..:.|.|.|:.|.
Zfish   595 ---LTFL----ALDQTKVSDAGLLLYLQSGSSALCQLSLNQTAITESTLRVLPASVPQLRMLSIK 652

  Fly   239 ICSLNRDEYRLGELRYLQSLVIKAHST--DTIRCKVSDWML--ISLLDVPF------------LR 287
            ...:: |...|.||:.||:|.:.....  ::::|..|...|  :||..:|.            ||
Zfish   653 HTKVS-DVSALAELKNLQTLHLDGTGVQENSLQCLASHPSLSALSLAGIPVADGNHTLEIIAGLR 716

  Fly   288 NLMFSDAPSGFVSANALSIISRFRQLRVLKMPNQPY---RPNDLLRLRNLTFLETLDLSNSPY-- 347
            ....:......|:.:.||.:|  ||..:|::....|   ..:.:.:|.::|.|:.|.|||:..  
Zfish   717 LTQLTLPGRHSVTDSGLSFLS--RQTLLLELDLTDYTQLTDHGITQLSSMTRLKKLSLSNTQVSD 779

  Fly   348 ---------------------ITNEVVIELVIGIPNLSVL 366
                                 :|:..|..|:..:|:|.|:
Zfish   780 SGLQGLIRLKELQELCLDRTAVTSRGVAALITHLPHLQVM 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 6/23 (26%)
leucine-rich repeat 157..179 CDD:275381 8/21 (38%)
leucine-rich repeat 180..204 CDD:275381 7/23 (30%)
leucine-rich repeat 205..231 CDD:275381 7/44 (16%)
leucine-rich repeat 232..285 CDD:275381 15/56 (27%)
leucine-rich repeat 286..326 CDD:275381 10/42 (24%)
AMN1 306..>376 CDD:187754 18/86 (21%)
leucine-rich repeat 337..362 CDD:275381 8/47 (17%)
si:ch73-173p19.1XP_002660968.3 UBA_like_SF 6..43 CDD:473871
tolA 108..>163 CDD:236545
UBX 189..257 CDD:340466
leucine-rich repeat 545..569 CDD:275381 6/23 (26%)
LRR 548..859 CDD:443914 67/292 (23%)
leucine-rich repeat 570..594 CDD:275381 11/32 (34%)
leucine-rich repeat 595..620 CDD:275381 8/28 (29%)
leucine-rich repeat 621..645 CDD:275381 2/23 (9%)
leucine-rich repeat 646..691 CDD:275381 12/45 (27%)
leucine-rich repeat 692..766 CDD:275381 15/75 (20%)
leucine-rich repeat 717..742 CDD:275381 6/26 (23%)
leucine-rich repeat 767..790 CDD:275381 5/22 (23%)
leucine-rich repeat 791..815 CDD:275381 3/23 (13%)
leucine-rich repeat 816..840 CDD:275381 2/3 (67%)
leucine-rich repeat 841..863 CDD:275381
leucine-rich repeat 864..888 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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