DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and fbxl20

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_002664757.2 Gene:fbxl20 / 100331130 ZFINID:ZDB-GENE-081031-27 Length:436 Species:Danio rerio


Alignment Length:264 Identity:64/264 - (24%)
Similarity:97/264 - (36%) Gaps:92/264 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 TSFSNLTYVSLRR-CQLNDENLVGWEFLTHLETLDLRYNDRLTGSCLMSLP---TSLLSLYITGC 188
            ||.:||:..:|.. |.|             ||.|::.:.|::|...:.:|.   ..|..|::.||
Zfish   154 TSITNLSLKALSEGCPL-------------LEQLNISWCDQVTKDGIQALVRCCPGLKGLFLKGC 205

  Fly   189 RNLCPNQLIFLNRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYRLGELR 253
            ..|....|..:                |||          ||.||.:.:..||...||..:...|
Zfish   206 TQLEDEALKHI----------------GGH----------CPELVTLNLQTCSQITDEGLITICR 244

  Fly   254 ---YLQSLVIK--AHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGFVSANALSIISRFRQL 313
               .||||.:.  |:.||.|                  .|.:..:.|                :|
Zfish   245 GCHRLQSLCVSGCANITDAI------------------LNALGQNCP----------------RL 275

  Fly   314 RVLKMPNQPYRPNDLLRL------RNLTFLETLDLSNSPYITNEVVIELVIGIPNLSVLIVQGCP 372
            |:|::.    |.:.|..:      ||...||.:||.....||:..:|:|.|..|.|.||.:..|.
Zfish   276 RILEVA----RCSQLTDVGFTSLARNCHELEKMDLEECVQITDATLIQLSIHCPRLQVLSLSHCE 336

  Fly   373 LLTN 376
            |:|:
Zfish   337 LITD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 4/23 (17%)
leucine-rich repeat 157..179 CDD:275381 6/24 (25%)
leucine-rich repeat 180..204 CDD:275381 6/23 (26%)
leucine-rich repeat 205..231 CDD:275381 4/25 (16%)
leucine-rich repeat 232..285 CDD:275381 15/57 (26%)
leucine-rich repeat 286..326 CDD:275381 6/39 (15%)
AMN1 306..>376 CDD:187754 22/75 (29%)
leucine-rich repeat 337..362 CDD:275381 9/24 (38%)
fbxl20XP_002664757.2 F-box_FBXL2-like 22..66 CDD:438887
leucine-rich repeat 65..92 CDD:275381
AMN1 93..289 CDD:187754 46/211 (22%)
leucine-rich repeat 93..112 CDD:275381
leucine-rich repeat 119..132 CDD:275381
leucine-rich repeat 145..170 CDD:275381 6/15 (40%)
leucine-rich repeat 171..196 CDD:275381 6/24 (25%)
leucine-rich repeat 197..222 CDD:275381 10/50 (20%)
AMN1 206..394 CDD:187754 47/199 (24%)
leucine-rich repeat 223..248 CDD:275381 7/24 (29%)
leucine-rich repeat 249..274 CDD:275381 10/58 (17%)
leucine-rich repeat 275..300 CDD:275381 7/28 (25%)
leucine-rich repeat 301..326 CDD:275381 9/24 (38%)
leucine-rich repeat 327..349 CDD:275381 6/14 (43%)
leucine-rich repeat 356..380 CDD:275381
leucine-rich repeat 381..406 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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