DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and fbxl20

DIOPT Version :9

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_002664757.2 Gene:fbxl20 / 100331130 ZFINID:ZDB-GENE-081031-27 Length:436 Species:Danio rerio


Alignment Length:264 Identity:64/264 - (24%)
Similarity:97/264 - (36%) Gaps:92/264 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 TSFSNLTYVSLRR-CQLNDENLVGWEFLTHLETLDLRYNDRLTGSCLMSLP---TSLLSLYITGC 188
            ||.:||:..:|.. |.|             ||.|::.:.|::|...:.:|.   ..|..|::.||
Zfish   154 TSITNLSLKALSEGCPL-------------LEQLNISWCDQVTKDGIQALVRCCPGLKGLFLKGC 205

  Fly   189 RNLCPNQLIFLNRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYRLGELR 253
            ..|....|..:                |||          ||.||.:.:..||...||..:...|
Zfish   206 TQLEDEALKHI----------------GGH----------CPELVTLNLQTCSQITDEGLITICR 244

  Fly   254 ---YLQSLVIK--AHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGFVSANALSIISRFRQL 313
               .||||.:.  |:.||.|                  .|.:..:.|                :|
Zfish   245 GCHRLQSLCVSGCANITDAI------------------LNALGQNCP----------------RL 275

  Fly   314 RVLKMPNQPYRPNDLLRL------RNLTFLETLDLSNSPYITNEVVIELVIGIPNLSVLIVQGCP 372
            |:|::.    |.:.|..:      ||...||.:||.....||:..:|:|.|..|.|.||.:..|.
Zfish   276 RILEVA----RCSQLTDVGFTSLARNCHELEKMDLEECVQITDATLIQLSIHCPRLQVLSLSHCE 336

  Fly   373 LLTN 376
            |:|:
Zfish   337 LITD 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 4/23 (17%)
leucine-rich repeat 157..179 CDD:275381 6/24 (25%)
leucine-rich repeat 180..204 CDD:275381 6/23 (26%)
leucine-rich repeat 205..231 CDD:275381 4/25 (16%)
leucine-rich repeat 232..285 CDD:275381 15/57 (26%)
leucine-rich repeat 286..326 CDD:275381 6/39 (15%)
AMN1 306..>376 CDD:187754 22/75 (29%)
leucine-rich repeat 337..362 CDD:275381 9/24 (38%)
fbxl20XP_002664757.2 F-box-like 28..70 CDD:289689
leucine-rich repeat 65..92 CDD:275381
AMN1 93..289 CDD:187754 46/211 (22%)
leucine-rich repeat 93..112 CDD:275381
leucine-rich repeat 119..132 CDD:275381
leucine-rich repeat 145..170 CDD:275381 6/15 (40%)
leucine-rich repeat 171..196 CDD:275381 6/24 (25%)
leucine-rich repeat 197..222 CDD:275381 10/50 (20%)
AMN1 206..394 CDD:187754 47/199 (24%)
leucine-rich repeat 223..248 CDD:275381 7/24 (29%)
leucine-rich repeat 249..274 CDD:275381 10/58 (17%)
leucine-rich repeat 275..300 CDD:275381 7/28 (25%)
leucine-rich repeat 301..326 CDD:275381 9/24 (38%)
leucine-rich repeat 327..349 CDD:275381 6/14 (43%)
leucine-rich repeat 356..380 CDD:275381
leucine-rich repeat 381..406 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588068
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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