DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32549 and AT5G48960

DIOPT Version :9

Sequence 1:NP_728163.2 Gene:CG32549 / 32822 FlyBaseID:FBgn0052549 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_199707.2 Gene:AT5G48960 / 834954 AraportID:AT5G48960 Length:642 Species:Arabidopsis thaliana


Alignment Length:628 Identity:186/628 - (29%)
Similarity:285/628 - (45%) Gaps:120/628 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PNCQRSRRNKGN-RRLSCSYASL--GRM---------------------QATPSEDAQPQDPLKS 114
            |:.::|.:.:|: |.:.|..|..  ||:                     |:|..:.....|||:|
plant    56 PDLRKSNKRRGSLRMIKCRAAGADGGRVAVGDDVFSVTTSSKYEVDYLGQSTKGDLNLKLDPLQS 120

  Fly   115 FERDFCDL--PPYQCEMSD--SAPN------TPGPCSTSALPKKYYRYAAHRVFVNRSLHLENIK 169
            |......|  |..:...::  :|.|      ..||.|....|:        .:|.:|:|:|.:|.
plant   121 FGDGQATLEGPIEEVARTEAQAAENLIRELGIQGPFSAQHSPR--------GIFCSRTLNLRSIS 177

  Fly   170 YYGFDMDYTLAEYKSPQYEQLGFNLVKERLVFMGYPKEILQFEYDPTFPVRGLWFDTLYGNLLKV 234
            ..|:||||||..|....:|...::...|.|..||:|.:.|.|  ||...:|||..|...|||:|.
plant   178 AIGYDMDYTLMHYNVMAWEGKAYDYCMENLKSMGFPVDGLAF--DPELVIRGLMIDKEKGNLVKA 240

  Fly   235 DAYGNILVCVHGFEFIKHHQVYELYPNKFLKL-DESRVYVLNTLFNLPETYLLACLVDFLTNSSD 298
            |.:|.:...:||.:.:.:..|.|:|..:.:.| ::||...|||.|::.|....|.:||       
plant   241 DRFGYVKRAMHGTKMLSNKAVSEIYGRELVDLRNQSRWEFLNTFFSVSEALAYAQMVD------- 298

  Fly   299 FVRVERGIKAGDL-LFTYKSIFQDVRRAVDWVHSDGDLKRRTTQNMAHYVKKDERLPTVLSRIRE 362
              |::.|..:.|| ...||.:::.|.:|:...|.:|.||.........:|:.|..||..|...:|
plant   299 --RLDDGFISADLGTLDYKGLYKAVAKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKE 361

  Fly   363 SGAKLFMLTNSDYTYTNEIMTYLFD--FPHGATPDEPHRDWKTYFDVIVVDARKPLFFDEGTVLR 425
            :|.||.::|||||.||:::|.:.|:  .|:       ..||:..||:::|.||||.||.....|.
plant   362 AGKKLLLITNSDYHYTDKMMKHSFNKFLPN-------DMDWRDLFDMVIVSARKPEFFQMSHPLY 419

  Fly   426 QVDTKTGSLKIGTHVGP---LQPGQVYSGGSCELFTKFINAKGKDVLYVGDHIFGDILKSKKIRG 487
            :|.|..|.::      |   .:.|.:|||||.::....:|..|.::|||||||:.|:..||....
plant   420 EVVTGEGLMR------PCFKAETGGLYSGGSAQMIESSLNVHGDEILYVGDHIYTDVSVSKVHLR 478

  Fly   488 WRTFLIVPELVRE---LHVWTDECQLFAELQNLDIKLGDLYRD----LDSSAKVKPDISQLRTCI 545
            |||.||..||..|   |.......:...||.|....:|||:..    |...:|.:|..:...|.:
plant   479 WRTALICRELEEEYMALIGSRGHREELIELINQKEVVGDLFNQLRLALQRRSKGRPAQTLAATNL 543

  Fly   546 RD------------VTHKMDMSYGMM----GSLFRSGSRQTFFS-----------SQVVRYADVY 583
            .|            |..::|...|:|    |.||  ..|..|.|           .|:.:|||:|
plant   544 DDQELTETMQKLLIVMQRLDDKIGLMLETDGELF--NKRWGFLSRAGLWDKSHLMRQIEKYADIY 606

  Fly   584 AATLLNLI-YYPFSYMFRAPAMLLPHESTVAHDQAHQPPPPLG 625
            .:.:.|.: |.||.| ||:      .|.::|||   .|.|..|
plant   607 TSRVSNFLNYTPFMY-FRS------QEQSLAHD---SPLPDAG 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32549NP_728163.2 5_nucleotid 165..610 CDD:283430 153/486 (31%)
AT5G48960NP_199707.2 5_nucleotid 173..633 CDD:283430 157/495 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D712212at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12103
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.