DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsf1 and tf

DIOPT Version :9

Sequence 1:NP_001285404.1 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001027487.1 Gene:tf / 613079 XenbaseID:XB-GENE-480506 Length:703 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf1NP_001285404.1 PBP2_transferrin 34..>302 CDD:270247
Periplasmic_Binding_Protein_Type_2 384..615 CDD:304360
TR_FER 384..614 CDD:214514
tfNP_001027487.1 PBP2_transferrin_N 26..340 CDD:270336
TR_FER 27..341 CDD:214514
Connecting region. /evidence=ECO:0000250 341..350
PBP2_transferrin_C 353..685 CDD:270335
TR_FER 354..686 CDD:214514
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11485
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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