DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf1 and tf

DIOPT Version :10

Sequence 1:NP_523401.2 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001027487.1 Gene:tf / 613079 XenbaseID:XB-GENE-480506 Length:703 Species:Xenopus tropicalis


Alignment Length:759 Identity:172/759 - (22%)
Similarity:286/759 - (37%) Gaps:202/759 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 HTWLPLAVAALLLILGPQSSLAEEPIYRLCV-PQIYLAECQQLLADPSEAGIRMECVAGRDRVDC 71
            |..|.|.:.||.|.:.|     :|...|.|. .:...::|:.|:.......|.:.||......:|
 Frog     6 HVALCLGMLALCLAMPP-----KEKQVRWCAKSKSEFSKCRDLVNTCKNKEITLSCVEKSSTDEC 65

  Fly    72 LELIEQRKADVLATEPEDMYIA----YHRK---NEDYRVISEIRTQQDKDAAFRYEGIILVKKDS 129
            |..|:..:||.:..:..|:|..    |:.|   .|:|...:|..|        .|..:.:|||.|
 Frog    66 LTAIQNDRADAICVDGGDVYKGSLQPYNLKPIMAENYGSHTEPDT--------CYYAVAVVKKSS 122

  Fly   130 PIRTLQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATERELKSLSEFFTQSCLV 194
            .. |..:||..:|||||.|:..|:.:.|..|....:||... |...:.|   |::|:||..||:.
 Frog   123 TF-TFDELRDKRSCHTGIGKTAGWNVIIGLLLEKQLLKWEG-PDTESLE---KAVSKFFKASCVP 182

  Fly   195 GTYSTHPETDRLLKKKYANLCALC--EKPEQC----NYPDKFSGYDGAIRCLDKGQGEVAFSKVQ 253
            |.             |...||..|  :|..:|    |.|  :..|.||.:||...:|:|||.|..
 Frog   183 GA-------------KEPKLCQQCAGKKEHKCARSNNEP--YYNYAGAFKCLQDDKGDVAFVKHS 232

  Fly   254 YIKKYFGLPGAGPDAPPAEGNPENFEYLCEDGTRRPVTG-PACSWAQRPWSGYISNEQAVHNSEQ 317
            .:              |.|.: :::|.||.|.||:|::. ..|:.|:.|....::..:...:.:.
 Frog   233 TV--------------PEELH-KDYELLCPDNTRKPISDYKNCNLAKVPAHSVLARARDDKSKDI 282

  Fly   318 LHQLQSRLE----RFFA--NGLQAQNKDAAAHLLIQP---------NAVYHSKDAAIDPKVYLER 367
            :..||...:    :.|:  :|.....||.|..|:..|         .|||:.       :::..:
 Frog   283 IAFLQEAQKTKECKLFSSQHGKDLLFKDTAVSLVPLPPTIDGFLFLGAVYYQ-------EIHALK 340

  Fly   368 AGYKDVIERDGSAIRKIRLCAQNDDEFAKCQALHQAAYARDARPELECVQST---DCVVALTKKE 429
            .|.|   |.|.:|..|:|.|.|:..|..||.     .:...:...:||.::.   ||::.:.|.:
 Frog   341 EGVK---EDDLAAPSKVRWCTQSKAEKTKCD-----DWTTISGGSIECTEAATAEDCILQILKGD 397

  Fly   430 ADLTIVRATGYADARSNQLQPIVYEQRAQDDV---------------LVAVAAPG---------- 469
            ||...:.......|....|.|::.|....||:               .||:|..|          
 Frog   398 ADAVTLDGGYMYTAGQCGLVPVMGEYYDLDDLTPCQRRSSQAKGVYYAVAIAKKGTKVSWKNLRG 462

  Fly   470 --------------------VTRE-------------ALQKASIKFN----------------EN 485
                                :|.|             ....:.:|.|                :.
 Frog   463 VKTCHTAVGRTAGWNIPVGLITNETNNCDFASYVGESCAPGSDVKSNLCKLCIGDPAKPLDSAKK 527

  Fly   486 CERSRAAAALLNKRRGLDACRVSSSD-------------DGEVQIVPASELEKHKDAQLVCPSLE 537
            |  |.:|:...:...|...|.|...|             ||:.....|.:| |..|.:|:||...
 Frog   528 C--SPSASEAYHGYSGAFRCLVEKGDVCFAKHTTVFENTDGKNPAAWAKDL-KSDDYELLCPDGS 589

  Fly   538 RRPVTDFRDCNVDVQLPRAIFIRSDTTSVEQETVKHLFSLISDKFGARGKLVDVFALFGEFQKGK 602
            |.|:.||:.||: .::|....:   |...:::.|..:.......:|.:|...|:|.:|.  .|..
 Frog   590 RAPINDFKRCNL-AEVPAHSVV---TLPGKRKPVVEILVNQQSLYGRKGFQKDIFQMFQ--SKDG 648

  Fly   603 KNVYFNDKAVQLTTELK-----NEIQNEQIYTDL----QCNANK 637
            |::.|.| :.|...|:.     .|...::.||.:    :|:..|
 Frog   649 KDLLFKD-STQCLLEISEKTTMQEFLGDKYYTAVTSLNKCSNTK 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf1NP_523401.2 TR_FER 34..323 CDD:214514 79/303 (26%)
Periplasmic_Binding_Protein_Type_2 384..615 CDD:473866 62/320 (19%)
tfNP_001027487.1 PBP2_transferrin_N 26..340 CDD:270336 90/363 (25%)
Connecting region. /evidence=ECO:0000250 341..350 4/11 (36%)
PBP2_transferrin_C 353..685 CDD:270335 67/346 (19%)

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