DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf1 and otomp

DIOPT Version :9

Sequence 1:NP_001285404.1 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001038552.1 Gene:otomp / 565818 ZFINID:ZDB-GENE-040709-1 Length:371 Species:Danio rerio


Alignment Length:335 Identity:82/335 - (24%)
Similarity:139/335 - (41%) Gaps:42/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAVAALLLILGPQSSLAEEPIYRLC-VPQIYLAECQQLLADPSEAGIR--MECVAGRDRVDCLEL 74
            |||...|.:|...|:  |..|.|.| |......:|..|..:.:...:|  :.||.|:...||::.
Zfish     8 LAVVLFLFVLVSMST--ENNIIRWCTVSDAEDQKCLDLAGNATARNLRGQLVCVRGQSPTDCMKQ 70

  Fly    75 IEQRKADVLATEPEDMYIAYH------RKNEDYRVISEIRTQQDKDAAFRYEGIILVKKDSPIRT 133
            |:...||......:::|.|..      ...|.|..:..|          .|..:.|.:..|...:
Zfish    71 IKNGTADASTMYADEIYTAGFCYGLDVAVGESYNGVDGI----------NYYVVALARTSSSDLS 125

  Fly   134 LQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATERELKSLSEFFTQSCLVGTYS 198
            |.::....|||.|....||:.:||..|.||.  ::|.|.|.:...    ::.:||..||:.|.  
Zfish   126 LLEMHERSSCHPGMRTTVGWTVPIGFLVNTS--QISVDVQCNFPH----AVGDFFGYSCVPGV-- 182

  Fly   199 THPETDRLLKKKYANLCALCEKPEQ-----CNYP-DKFSGYDGAIRCLDKGQGEVAFSKVQYIKK 257
            ..||.|. ......|||..|...|.     .|.| ::..|..||:||:.:..|:|||  |::...
Zfish   183 KDPEHDP-KGNNPRNLCEACIGDENDRHICANNPRERHFGEAGALRCVAENLGDVAF--VKHTTV 244

  Fly   258 YFGLPGAGPDAPPAEGNPENFEYLCEDGTRRPV-TGPACSWAQRPWSGYISNEQAVHNSEQLHQL 321
            :..:.|...::...:...|:.:.||.||:...: ...:|..|..|.:..:..   :.:..::::.
Zfish   245 FDNMQGKNQESWALDLELEDLKLLCPDGSEANLFQHESCHLAVVPTNAVVVR---LEDKCRVYKF 306

  Fly   322 QSRLERFFAN 331
            ..|::..|.|
Zfish   307 LERVQNAFGN 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf1NP_001285404.1 PBP2_transferrin 34..>302 CDD:270247 70/283 (25%)
Periplasmic_Binding_Protein_Type_2 384..615 CDD:304360
TR_FER 384..614 CDD:214514
otompNP_001038552.1 TR_FER 27..363 CDD:214514 74/314 (24%)
PBP2_transferrin 27..363 CDD:270247 74/314 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28KI0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.780

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