DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Tsf1 and SrpRbeta

DIOPT Version :9

Sequence 1:	NP_001285404.1	Gene:	Tsf1 / 32821	FlyBaseID:	FBgn0022355	Length:	641	Species:	Drosophila melanogaster
Sequence 2:	NP_001261596.1	Gene:	SrpRbeta / 47283	FlyBaseID:	FBgn0011509	Length:	244	Species:	Drosophila melanogaster

Alignment Length:	165	Identity:	37/165 - (22%)
Similarity:	65/165 - (39%)	Gaps:	44/165 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    56 AGIRMECVAGRDRV--DCLELIEQR-KADVLATEPEDMYIAYHRKNED-----YRVISEIRTQ-- 110
            |..|:..:.|..||  .||||.:.| |..|...:.    :..|:...|     |.::|:..||
  Fly    92 ASARLVDIPGHYRVRDKCLELYKHRAKGIVFVVDS----VTAHKDIRDVADFLYTILSDSATQPC 152

  Fly   111 --------QDKDAAFRYEGIILVKKDSPIRTLQQLR-----------GAKSCHTGF-GRNVGYKI 155
                    ||:..| :...:|....:|.:.|::..|           |:||...|. ||:..:
  Fly   153 SVLVLCNKQDQTTA-KSAQVIKSLLESELHTVRDTRSRKLQSVGDEDGSKSITLGKPGRDFEF-- 214

  Fly   156 PITKLKNTHVLKVSADPQISATERELKSLSEFFTQ 190
                   :|:.:.....:.||.:.||..|:::..:
  Fly   215 -------SHIAQNIQFAEASAKDTELDPLTDWLAR 242

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Tsf1	NP_001285404.1	PBP2_transferrin	34..>302	CDD:270247	37/165 (22%)
		Periplasmic_Binding_Protein_Type_2	384..615	CDD:304360
		TR_FER	384..614	CDD:214514
SrpRbeta	NP_001261596.1	SR_beta	49..243	CDD:206691	37/165 (22%)
SrpRbeta	NP_001261596.1	SRPRB	51..221	CDD:255367	32/142 (23%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11485
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100