DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf1 and Tf

DIOPT Version :10

Sequence 1:NP_523401.2 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_001013128.1 Gene:Tf / 24825 RGDID:3845 Length:698 Species:Rattus norvegicus


Alignment Length:722 Identity:174/722 - (24%)
Similarity:270/722 - (37%) Gaps:191/722 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAVAALLLILGPQSSLAEEPIYRLCVPQIYLAEC--------QQLLADPSEAGIRMECVAGRDRV 69
            ||.|||.|.|    ::.::.:....|.:....:|        ..|.||    |.|:.||......
  Rat     9 LACAALGLCL----AVPDKTVKWCAVSEHENTKCISFRDHMKTVLPAD----GPRLACVKKTSYQ 65

  Fly    70 DCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKDAAFRYEGIILVKKDSPIRTL 134
            ||::.|...:||.:..:...:|.|....|....|.:|.....:.... .|..:.:|||.:..: |
  Rat    66 DCIKAISGGEADAITLDGGWVYDAGLTPNNLKPVAAEFYGSLEHPQT-HYLAVAVVKKGTDFQ-L 128

  Fly   135 QQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATEREL-KSLSEFFTQSCLVGTYS 198
            .||:|.||||||.||:.|:.|||..|          ...:....:.| |:::.||:.||:     
  Rat   129 NQLQGKKSCHTGLGRSAGWIIPIGLL----------FCNLPEPRKPLEKAVASFFSGSCV----- 178

  Fly   199 THPETDRLLKKKYANLCALCEKPEQCNYPDKFSGYDGAIRCLDKGQGEVAFSKVQYIKKYFGLPG 263
              |..|.:...:...||..|    .|:....|.||.||.:||..|.|:|||.|...|.:..    
  Rat   179 --PCADPVAFPQLCQLCPGC----GCSPTQPFFGYVGAFKCLRDGGGDVAFVKHTTIFEVL---- 233

  Fly   264 AGPDAPPAEGNPENFEYLCEDGTRRPVTG-PACSWAQRPWSGYISNEQAVHNSEQLHQL------ 321
                  |.:.:.:.:|.||.|.||:||.. ..|..|:.|     |:.....|.:....|      
  Rat   234 ------PQKADRDQYELLCLDNTRKPVDQYEDCYLARIP-----SHAVVARNGDGKEDLIWEILK 287

  Fly   322 ---------QSRLERFFAN--GLQAQNKDAAAHLLIQPNAVYHSKDAAIDPKVYLERAGYKDVI- 374
                     :|:..:.|.:  |.....||:|..||..|        ..:|.::||..: |...| 
  Rat   288 VAQEHFGKGKSKDFQLFGSPLGKDLLFKDSAFGLLRVP--------PRMDYRLYLGHS-YVTAIR 343

  Fly   375 -ERDG--------SAIRKIRLCAQNDDEFAKCQALHQAAYARDARPELECVQST-DCVVALTKKE 429
             :|:|        ||  .::.||.:..|.|||.   :.:.:.:.:.|.|..:|| ||:..:...|
  Rat   344 NQREGVCPEGSIDSA--PVKWCALSHQERAKCD---EWSVSSNGQIECESAESTEDCIDKIVNGE 403

  Fly   430 AD-LTIVRATGYADARSNQLQPIVYEQ-------RAQDDVL----VAVAAPGVTREALQKASIKF 482
            || :::.....|...:.. |.|::.|.       ..|.||.    .|||....:..::...::|.
  Rat   404 ADAMSLDGGHAYIAGQCG-LVPVMAENYDISSCTNPQSDVFPKGYYAVAVVKASDSSINWNNLKG 467

  Fly   483 NENCER--SRAAA-----ALL---------------------------------------NKRRG 501
            .::|..  .|.|.     .||                                       |.|.|
  Rat   468 KKSCHTGVDRTAGWNIPMGLLFSRINHCKFDEFFSQGCAPGYKKNSTLCDLCIGPAKCAPNNREG 532

  Fly   502 LDA------CRVSSSD-------------DGEVQIVPASELEKHKDAQLVCPSLERRPVTDFRDC 547
            .:.      |.|...|             :|:.....|.:| |.:|.||:||...::|||:|..|
  Rat   533 YNGYTGAFQCLVEKGDVAFVKHQTVLENTNGKNTAAWAKDL-KQEDFQLLCPDGTKKPVTEFATC 596

  Fly   548 NVDVQLPRAIFIRSDTTSVEQETV----KHLFSLISDKFGARGKLVDVFALFGEFQKGKKNVYFN 608
            :: .|.|..:.:.....:....||    |.|| ...||        |....|..|:...|::.|.
  Rat   597 HL-AQAPNHVVVSRKEKAARVSTVLTAQKDLF-WKGDK--------DCTGNFCLFRSSTKDLLFR 651

  Fly   609 DKAVQLT 615
            |....||
  Rat   652 DDTKCLT 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf1NP_523401.2 TR_FER 34..323 CDD:214514 81/313 (26%)
Periplasmic_Binding_Protein_Type_2 384..615 CDD:473866 66/312 (21%)
TfNP_001013128.1 PBP2_transferrin_N 24..346 CDD:270336 95/372 (26%)
PBP2_transferrin_C 357..682 CDD:270335 70/319 (22%)

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