DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsf1 and LOC100498607

DIOPT Version :9

Sequence 1:NP_001285404.1 Gene:Tsf1 / 32821 FlyBaseID:FBgn0022355 Length:641 Species:Drosophila melanogaster
Sequence 2:XP_031748086.1 Gene:LOC100498607 / 100498607 -ID:- Length:749 Species:Xenopus tropicalis


Alignment Length:761 Identity:159/761 - (20%)
Similarity:261/761 - (34%) Gaps:231/761 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MSPH----KTHTWLPLAVAALLLILGPQSSLAEEPIYRLCVPQIYLAECQQLLADPSEAGIRMEC 62
            |.||    |...|..|            |.|.:    |.|   .:||...|.:...|.|..|:.|
 Frog    19 MLPHTPSGKKFRWCTL------------SDLEQ----RKC---SHLARTLQTILPASHAFSRVSC 64

  Fly    63 VAGRDRVDCLELIEQRKADVLATEPEDMYIAYHRKNEDYRVISEIRTQQDKDAAFRYEGIILVKK 127
            |......||:..|...|||.::.:..|:|.|.  |..|..|:::   ::..|.:..| .:.:.::
 Frog    65 VRAHTTQDCMSKIRGNKADAVSLDAGDVYTAI--KQYDLAVVAK---ERHSDGSCVY-AVAVARR 123

  Fly   128 DSPIRTLQQLRGAKSCHTGFGRNVGYKIPITKLKNTHVLKVSADPQISATERELKSLSEFFTQSC 192
            .:  ..:.:|...:|||.|.....|:.||.....:.::|....:..:|      |.:|.:|..||
 Frog   124 GT--LNIHKLNRTRSCHNGARWTSGWNIPFGFFLSKNLLHWDEEQPLS------KVVSAYFNASC 180

  Fly   193 LVGTYSTHPETDRLLKKKYANLCALCEKPE----------QCNYPDKFSGYDGAIRCLDKGQGEV 247
            :.|.....|           |||.||:..:          :.:..:.|:..|||.|||..|.|:|
 Frog   181 IPGIGIASP-----------NLCELCQGSKSYVRDRNNFCEISSNEPFADSDGAFRCLKNGGGDV 234

  Fly   248 AFSKVQYIKKYFGLPGAGPDAPPAEGNPENFEYLCEDGTRRPVTG-PACSWAQRPWSGYISNEQA 311
            ||.....|            ..|.|...:.||.||.||:...::. ..|:..|.|       .:|
 Frog   235 AFMDHLAI------------MTPTESEMQEFELLCPDGSTANLSSFQYCNLGQGP-------GKA 280

  Fly   312 VHNSEQLHQLQSR----LERFFANGLQAQNKDAAAHLLIQP----NAVYHSKDAAIDPKVYLERA 368
            :.....||::..|    ::..|  ||:.:.|...:.....|    |.::|  |:.::.::....|
 Frog   281 IVTRGHLHRVTKRFLVLIQDLF--GLKRKEKRRFSLFSSLPFGGQNLMFH--DSTLELQILGNEA 341

  Fly   369 GYKDVIERDGSAIRK-------------IRLCAQNDDEFAKCQALHQAAYARDARPE-LECVQST 419
            ....|:..|..|:.|             ||.|..:..|..||:     .:|.:.:.: |.|:.:|
 Frog   342 DVSSVLGMDYVALLKGLGHEGISLDHSVIRWCCISTAELQKCE-----DWAMNVKSDPLVCILTT 401

  Fly   420 D---CVVALTKKEADLTIVRATGYADARSNQLQPIVYE-----QRAQDD--------------VL 462
            .   |:..:.:.|||...:.||....|....|||...|     .....|              .|
 Frog   402 SLTGCIEMIKRNEADAVSLDATHAYIAAKCGLQPAAVEYWGHVSECPTDPYQMPLNITEKGFPTL 466

  Fly   463 VAVAAPGVTREALQKASIKFNENCE---RSRAAAALLNKRRGLDACRVSSSDDGEVQI------- 517
            .|:|....:..|:..:.:....:|.   .|.|...||:|.    ..|.:.:|..:..|       
 Frog   467 FALAVTKKSNRAVSLSGMSSRRSCHGNIYSVAGWLLLSKY----TVRGNKNDTWDCDINSAYKNY 527

  Fly   518 -----VPASE----------------------------------------------------LEK 525
                 :|.:|                                                    ||.
 Frog   528 FWKGCMPGAEHNLCKVCIGWEEGDRLMGRCTANHKERYYGNPGALRCLVGDPEGRSFGDVAFLEH 592

  Fly   526 H--------------------KDAQLVCPSLERRPVTDFRDCNVDVQLPRAIFIRSDTTSVEQET 570
            |                    .|.:|:||...|..:||:.:||:....|..:..|...|:     
 Frog   593 HSLLENIENLESSGWAHGFSASDFELLCPDESRAALTDWHNCNLGTVPPNVVMTRPIITA----- 652

  Fly   571 VKHLFSLISDKFGARGKLVDVFALFGEFQK--GKKNVYFNDKAVQL 614
             |....:|..:.|.|.:....|.|| :.:|  |:.::.|.|....|
 Frog   653 -KIYDFIIKSQDGLRPEKGSDFQLF-QSRKIYGEGDLLFKDSTTCL 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsf1NP_001285404.1 PBP2_transferrin 34..>302 CDD:270247 69/278 (25%)
Periplasmic_Binding_Protein_Type_2 384..615 CDD:304360 64/343 (19%)
TR_FER 384..614 CDD:214514 63/341 (18%)
LOC100498607XP_031748086.1 TR_FER 30..358 CDD:214514 91/394 (23%)
TR_FER 370..713 CDD:214514 64/343 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D125278at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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