| Sequence 1: | NP_523400.1 | Gene: | betaCOP / 32820 | FlyBaseID: | FBgn0008635 | Length: | 964 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_956632.1 | Gene: | ap4b1 / 393309 | ZFINID: | ZDB-GENE-040426-1284 | Length: | 729 | Species: | Danio rerio |
| Alignment Length: | 826 | Identity: | 155/826 - (18%) |
|---|---|---|---|
| Similarity: | 277/826 - (33%) | Gaps: | 251/826 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 38 ETLKRVIKLLLNGE------RYPGLIMTIIRFVLPVQNHTIKKLLLIFWEIVPKTSADGKLLQE- 95
Fly 96 ----------------MILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDH 144
Fly 145 RHSYVRRNAVL---------------------------------------AIFTIYKNFDWLVPD 170
Fly 171 GPELIASFLDTQQDMSCKRNA----FLMLLHADQERALNYLASCID------QVHTFGDILQLVI 225
Fly 226 VELIYKVCHANPAERSRFIRCIYNLLNSSSNAVRYESAGTLITLSLAPTAIKAAASCYIELVVK- 289
Fly 290 ----------------ESDNNVKLIVLDRLVAMKEHEGMEKVMQDLVMDVLRVLAAPDIEVRRKT 338
Fly 339 LALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAANVIPVLV 403
Fly 404 EFLSDTNELAAADVLIFIREAIQKFPALRA---LIIEHLIEAFPQIKSSKIHRAAVWILGE---- 461
Fly 462 ----------YVEGSQI-------LEVI-----------AVIQQTLGEV--PMVEAEQRRLAGDQ 496
Fly 497 T--EEQKQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTYATQSAYSLAPVAKAEKRPPLRQYLM 559
Fly 560 DGDFFIGAALSAT---LTKLALRYAELETEARAQNRLTTQVMLIMSSILHLGKSGFPSKPITNDD 621
Fly 622 TDRIFVCLRTLSERTPEAISVFTLYCREALGKMLDAQHDED-----------QRMLKEKQKAT-- 673
Fly 674 -AKVQPDDP-VLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQLS 717 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| betaCOP | NP_523400.1 | Adaptin_N | 17..562 | CDD:279882 | 121/651 (19%) |
| Coatamer_beta_C | 678..820 | CDD:285019 | 11/41 (27%) | ||
| Coatomer_b_Cpla | 826..953 | CDD:291472 | |||
| ap4b1 | NP_956632.1 | Adaptin_N | 11..525 | CDD:279882 | 110/591 (19%) |
| HEAT repeat | 86..113 | CDD:293787 | 10/26 (38%) | ||
| Cnd1 | 98..>225 | CDD:289487 | 29/127 (23%) | ||
| HEAT repeat | 120..150 | CDD:293787 | 11/29 (38%) | ||
| HEAT repeat | 159..185 | CDD:293787 | 1/25 (4%) | ||
| HEAT repeat | 196..222 | CDD:293787 | 4/26 (15%) | ||
| HEAT repeat | 233..257 | CDD:293787 | 5/28 (18%) | ||
| B2-adapt-app_C | 614..718 | CDD:286193 | 17/107 (16%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||