Sequence 1: | NP_523400.1 | Gene: | betaCOP / 32820 | FlyBaseID: | FBgn0008635 | Length: | 964 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492170.2 | Gene: | apb-3 / 172553 | WormBaseID: | WBGene00000163 | Length: | 945 | Species: | Caenorhabditis elegans |
Alignment Length: | 859 | Identity: | 156/859 - (18%) |
---|---|---|---|
Similarity: | 310/859 - (36%) | Gaps: | 191/859 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTSQVPCYTIINSPDLEV----------TNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPG 55
Fly 56 LIMTIIRFVLPVQNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLR 120
Fly 121 FLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYK-----------NFDWLVPDGPEL 174
Fly 175 IASFLDTQQDMSCKRNAFLMLLHADQERALNYLASC--IDQVHTFGDILQLVIVELIYKVCH--- 234
Fly 235 ANPAERSRFIRCIYNLLNSSSNAVRYESAGTLITL-----SLAPTA-IKAAASCYIELVVKESDN 293
Fly 294 NVKLIVLDRLVAMKEHEGME-------KVMQDLVMDVLRVLAAPDIEVRRKTLALALDLVYSRNI 351
Fly 352 GEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAANVIPVLVEFLSDTNELAAAD 416
Fly 417 VLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKIHRAAVWILGEYVE-----GSQILEVIAVIQ 476
Fly 477 QTLGEVPMVEAEQRRLA-------GDQTEEQKQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTY 534
Fly 535 ATQS---------------AYSLAPVAKAEK-RPPLRQYLMDGDFFIGAALSATLTKLALRYAEL 583
Fly 584 ETEARAQNRLTTQVMLIMSSILHLGKSGFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCR 648
Fly 649 EALGKMLDAQHDEDQRMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKN 713
Fly 714 AQLSDVASPNSKLN------KVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLE 772
Fly 773 LATLGDLKLVERPH 786 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
betaCOP | NP_523400.1 | Adaptin_N | 17..562 | CDD:279882 | 114/611 (19%) |
Coatamer_beta_C | 678..820 | CDD:285019 | 17/115 (15%) | ||
Coatomer_b_Cpla | 826..953 | CDD:291472 | |||
apb-3 | NP_492170.2 | Adaptin_N | 23..546 | CDD:279882 | 110/575 (19%) |
Motor_domain | <35..84 | CDD:277568 | 14/49 (29%) | ||
HEAT repeat | 100..128 | CDD:293787 | 9/32 (28%) | ||
HEAT repeat | 134..162 | CDD:293787 | 8/27 (30%) | ||
HEAT repeat | 171..197 | CDD:293787 | 4/25 (16%) | ||
AP3B1_C | <740..826 | CDD:291462 | 1/2 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |