Sequence 1: | NP_523400.1 | Gene: | betaCOP / 32820 | FlyBaseID: | FBgn0008635 | Length: | 964 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006540634.1 | Gene: | Ap3b2 / 11775 | MGIID: | 1100869 | Length: | 1101 | Species: | Mus musculus |
Alignment Length: | 1074 | Identity: | 210/1074 - (19%) |
---|---|---|---|
Similarity: | 375/1074 - (34%) | Gaps: | 253/1074 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 LKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVLPVQNHTIKKLLLIFWEIVPKTSA 88
Fly 89 DGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNA 153
Fly 154 VLAIFTIY-----------KNFDWLVPDGPELIASFLDTQQDMSCKRNAFLMLLHADQERALNYL 207
Fly 208 ASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYN--LLNSSSNAVRY---------- 260
Fly 261 --ESAGTL-----------------------ITLSLAPTAIKAAASCYIELVVK----------- 289
Fly 290 ---ESDNNVKLIVLDRLVAMK-EHEGM-EKVMQDLVMDVLRVLAAPDIEVRRKTLALALDLVYSR 349
Fly 350 NIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAANVIPVLVEFLSDTNELAA 414
Fly 415 ADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKIHRAAVWILGEYVEGSQILEVIAVIQQTL 479
Fly 480 GEVPMVEAE-QRRLAGDQTEEQ---KQQQGSAGGNAAGSAAEGSGSGNASNKVTSDGTYATQSAY 540
Fly 541 SLAP-----------------VAKAEK-----------------RPPLRQYLMDGDFFIGAALSA 571
Fly 572 TLTKLALRYAEL------ETEARAQNRLTTQVMLIMSSILHLG---------------KSGFPSK 615
Fly 616 PITNDDTDRIFVCLRTLSERTPEAISVFTLYCREALGKMLDAQHDEDQRMLK------------- 667
Fly 668 EKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQLSDVA-----SPNSKLN 727
Fly 728 KVTQ------LTGFSDP-VYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLE-LATLGDLKLVER 784
Fly 785 --------------------PHPVVLAPHDFCN-----IKA-NVKVSSTENGIIFGNIVYETALN 823
Fly 824 TNVVVLNTIHIDIMDYIIPAS---CTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNM 885
Fly 886 KCLTPEKALSGQCGFMAANMYAKSIFGENALANL 919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
betaCOP | NP_523400.1 | Adaptin_N | 17..562 | CDD:279882 | 124/639 (19%) |
Coatamer_beta_C | 678..820 | CDD:285019 | 33/180 (18%) | ||
Coatomer_b_Cpla | 826..953 | CDD:291472 | 22/97 (23%) | ||
Ap3b2 | XP_006540634.1 | Adaptin_N | 34..590 | CDD:366724 | 120/609 (20%) |
HEAT repeat | 111..139 | CDD:293787 | 8/32 (25%) | ||
HEAT repeat | 145..173 | CDD:293787 | 9/27 (33%) | ||
HEAT repeat | 182..208 | CDD:293787 | 4/25 (16%) | ||
AP3B1_C | 823..966 | CDD:373301 | 26/143 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5096 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |