Sequence 1: | NP_523400.1 | Gene: | betaCOP / 32820 | FlyBaseID: | FBgn0008635 | Length: | 964 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001135674.1 | Gene: | copb1 / 100216235 | XenbaseID: | XB-GENE-975104 | Length: | 953 | Species: | Xenopus tropicalis |
Alignment Length: | 964 | Identity: | 652/964 - (67%) |
---|---|---|---|
Similarity: | 778/964 - (80%) | Gaps: | 30/964 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 CYTIINSP-DLEVTNEMQLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVLPVQNH 70
Fly 71 TIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLM 135
Fly 136 PAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGPELIASFLDTQQDMSCKRNAFLMLLHADQ 200
Fly 201 ERALNYLASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLLNSSSNAVRYESAGT 265
Fly 266 LITLSLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKVMQDLVMDVLRVLAAP 330
Fly 331 DIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNV-EHEDTGKYRQLLVRTLHTCSIKFPDV 394
Fly 395 AANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSSKIHRAAVWIL 459
Fly 460 GEYVEGSQ-ILEVIAVIQQTLGEVPMVEAEQRRLAGDQTEEQKQQQGSAGGNAAGSAAEGSGSGN 523
Fly 524 ASNKVTSDGTYATQSAYSLA-PVAKAEKRPPLRQYLMDGDFFIGAALSATLTKLALRYAELETEA 587
Fly 588 RAQNRLTTQVMLIMSSILHLGKSGFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCREALG 652
Fly 653 KMLDAQHDEDQ-RMLKEKQKATAKVQPDDPVLFAQLSNGRDNQLGENVFESSLNQALAGSKNAQL 716
Fly 717 SDVASP-NSKLNKVTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLK 780
Fly 781 LVERPHPVVLAPHDFCNIKANVKVSSTENGIIFGNIVYE---TALNTNVVVLNTIHIDIMDYIIP 842
Fly 843 ASCTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCLTPEKALSGQCGFMAANMYA 907
Fly 908 KSIFGENALANLSIEKPVD-DPDSKVTGHIRIRAKSQGMALSLGDKISSSQKQS 960 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
betaCOP | NP_523400.1 | Adaptin_N | 17..562 | CDD:279882 | 375/547 (69%) |
Coatamer_beta_C | 678..820 | CDD:285019 | 101/145 (70%) | ||
Coatomer_b_Cpla | 826..953 | CDD:291472 | 104/127 (82%) | ||
copb1 | NP_001135674.1 | Adaptin_N | 26..550 | CDD:279882 | 373/540 (69%) |
HEAT repeat | 137..161 | CDD:293787 | 22/23 (96%) | ||
HEAT repeat | 173..211 | CDD:293787 | 25/37 (68%) | ||
HEAT repeat | 221..272 | CDD:293787 | 43/50 (86%) | ||
HEAT repeat | 280..307 | CDD:293787 | 22/26 (85%) | ||
HEAT repeat | 318..342 | CDD:293787 | 17/23 (74%) | ||
Coatamer_beta_C | 667..807 | CDD:285019 | 101/142 (71%) | ||
Coatomer_b_Cpla | 816..944 | CDD:291472 | 104/127 (82%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 708 | 1.000 | Domainoid score | I121 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5664 | |
Inparanoid | 1 | 1.050 | 1263 | 1.000 | Inparanoid score | I172 |
OMA | 1 | 1.010 | - | - | QHG54031 | |
OrthoDB | 1 | 1.010 | - | - | D117726at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004277 | |
OrthoInspector | 1 | 1.000 | - | - | oto103367 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10635 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R227 |
SonicParanoid | 1 | 1.000 | - | - | X3011 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 12.110 |