DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CrebB and pcr1

DIOPT Version :9

Sequence 1:NP_001334685.1 Gene:CrebB / 32817 FlyBaseID:FBgn0265784 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_594500.1 Gene:pcr1 / 2542047 PomBaseID:SPAC21E11.03c Length:171 Species:Schizosaccharomyces pombe


Alignment Length:54 Identity:22/54 - (40%)
Similarity:32/54 - (59%) Gaps:1/54 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 DQTRKREIRLQKNREAARECRRKKKEYIKCLENRVAVLENQNKALIEELKSLKE 323
            |..::|.| |::||.||.:.|:||||:||.||........|:|.|...|..|::
pombe     9 DDEKRRRI-LERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQ 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrebBNP_001334685.1 None
pcr1NP_594500.1 bZIP_ATF2 12..72 CDD:269835 21/51 (41%)
coiled coil 12..72 CDD:269835 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R103
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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