DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6106 and PYD2

DIOPT Version :9

Sequence 1:NP_001285403.1 Gene:CG6106 / 32816 FlyBaseID:FBgn0030914 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_568258.2 Gene:PYD2 / 831093 AraportID:AT5G12200 Length:531 Species:Arabidopsis thaliana


Alignment Length:496 Identity:120/496 - (24%)
Similarity:201/496 - (40%) Gaps:97/496 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GDGSQNALIHGGIIVDT-----------EGIIRRV---LRSPQEVNTYLYNTESESVYDFGDLVL 63
            |..|...||.||.:|:.           .|||..|   ::...||          :|.|.....:
plant    41 GVSSTRILIKGGTVVNAHHQELADVYVENGIIVAVQPNIKVGDEV----------TVLDATGKFV 95

  Fly    64 MPGLIDPNVHI--NEPGRKDWEGFATATKAAAAGGFTTIID--RPTNAQPPTVSVAHLKAKTSTA 124
            |||.|||:.|:  ...|.:..:.|.:...||.|||.|..||  .|.|..    .||..:|..:.:
plant    96 MPGGIDPHTHLAMEFMGTETIDDFFSGQAAALAGGTTMHIDFVIPVNGN----LVAGFEAYENKS 156

  Fly   125 RGKIYVDVGF------WGGLVPGNGDQLAALLGAGVMGLQCTLCDPAAPVSQEFPAVNESQLEEA 183
            | :..:|.||      |...|..:.:.|  :...|:...:..|....:.:      |.:..|.|.
plant   157 R-ESCMDYGFHMAITKWDEGVSRDMEML--VKEKGINSFKFFLAYKGSLM------VTDDLLLEG 212

  Fly   184 LSQLDKDQAEGEAIVAVHA--------------ELPLTTEIHPDEEAPREYGTFLVTRPPQMEIS 234
            |.:.   ::.| |:..|||              ||.:|   .|:..|        ::|||.:|..
plant   213 LKRC---KSLG-ALAMVHAENGDAVFEGQKRMIELGIT---GPEGHA--------LSRPPVLEGE 262

  Fly   235 ATQLLCRLAN--RHPRRCIHILNCSSGESLPLVEECRRQGGNLTVDTCPHYLALAAED----VPD 293
            ||....|||.  ..|...:|::   |.:::..:.:.|:.|..:..:  |....|..:|    .||
plant   263 ATARAIRLARFINTPLYVVHVM---SVDAMDEIAKARKSGQKVIGE--PVVSGLILDDHWLWDPD 322

  Fly   294 --CGTEFKTWPPIRERRNQEQLWQALRPGGAIRMIGSDHSPATPGARALTCGRGRGNFLKAWPGI 356
              ..:::...||||...:.:.|..||.. |.::::|:||.......:||    |..:|.:...|:
plant   323 FTIASKYVMSPPIRPVGHGKALQDALST-GILQLVGTDHCTFNSTQKAL----GLDDFRRIPNGV 382

  Fly   357 NSLQLSLSVVWTAAANRRGSANLTIADIHRLMCQEPANLCGLSASKGRIAEGYDADFCVWSPEEE 421
            |.|:..:.::|.....   |..|:..|..|:...|.|.:..:...||.|..|.|||..:.:|...
plant   383 NGLEERMHLIWDTMVE---SGQLSATDYVRITSTECARIFNIYPRKGAILAGSDADIIILNPNSS 444

  Fly   422 FTVGPELLYTATKATPYAGQKLRGVVHATVVRGLHVYQQFE 462
            :.:..:..::.:....|.|::.:|.|..|:..|..|::..|
plant   445 YEISSKSHHSRSDTNVYEGRRGKGKVEVTIAGGRIVWENEE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6106NP_001285403.1 L-HYD_ALN 2..473 CDD:238640 120/496 (24%)
PYD2NP_568258.2 PLN02942 41..526 CDD:178530 120/496 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D719800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.