DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6106 and crmp1

DIOPT Version :9

Sequence 1:NP_001285403.1 Gene:CG6106 / 32816 FlyBaseID:FBgn0030914 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001072314.1 Gene:crmp1 / 779767 XenbaseID:XB-GENE-992563 Length:680 Species:Xenopus tropicalis


Alignment Length:507 Identity:126/507 - (24%)
Similarity:209/507 - (41%) Gaps:95/507 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SQNALIHGGIIVD-----------TEGIIRRV---LRSPQEVNTYLYNTESESVYDFGDLVLMPG 66
            |...||.||.|::           .:|:|:::   |..|..|.|...|         |.:|: ||
 Frog   122 SDRLLIKGGRIINDDQSFYADVYFEDGLIKQIGENLIVPGGVKTIEAN---------GRMVI-PG 176

  Fly    67 LIDPNVHINEP--GRKDWEGFATATKAAAAGGFTTIIDR----PTNAQPPTVSVAHLKAKT-STA 124
            .||.|.::.:|  |....:.|...||||.|||.|.|||.    |.:.........|..|.| |..
 Frog   177 GIDVNTYLQKPYLGMSTLDDFYQGTKAAVAGGTTMIIDHVVPDPGSNLLSCFEKWHEVADTKSCC 241

  Fly   125 RGKIYVDVGFWGGLVPGNGDQLAALL-GAGVMGLQCTLCDPAAPVSQEFPAVNESQLEEALSQLD 188
            ...::||:..|   ..|..::|..|: ..||...|..:      ..::...:.:|||.|....| 
 Frog   242 DYSLHVDITNW---YDGIREELDILIQDKGVNSFQVYM------AYKDLYQMTDSQLYEIFMYL- 296

  Fly   189 KDQAEG-EAIVAVHAE---LPLTTEIHPDEEAPREYGT-----FLVTRPPQMEISATQLLCRLAN 244
                :| .|:|.||||   |     |..:::...|.|.     ..::||.::|..|......:|:
 Frog   297 ----KGLGAVVMVHAENGDL-----IAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAS 352

  Fly   245 RHPRRC-IHILNCSSGESLPLVEECRRQGGNLTVDTCPHYLALAAEDVPDCGTEF--KTW----- 301
            |  ..| ::|....|..:..::.:.|::|..:..:  |...:|..:     ||.:  |.|     
 Frog   353 R--INCPVYITKVMSKSASDVIAQARKKGALVFGE--PITASLGTD-----GTHYWSKNWAKAAA 408

  Fly   302 ----PPIRERRNQEQLWQALRPGGAIRMIGSDHSPATPGARALTCGRGRGNFLKAWPGINSLQLS 362
                ||:...........:|...|.:::.||.|...:...:|:    |:.||.....|:|.::..
 Frog   409 FVTSPPLSPDPTTPDYLNSLLACGDLQVTGSGHCSYSTAQKAI----GKDNFTLIPEGVNGIEER 469

  Fly   363 LSVVW-TAAANRRGSANLTIADIHRLMCQEPANLCGLSASKGRIAEGYDADFCVWSPEEEFTVGP 426
            :|:|| .|.|..:...|..:|    :.....|.:..|...|||||.|.|||..:|.|::...|..
 Frog   470 MSIVWDKAVATGKMDENQFVA----VTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKIKAVSA 530

  Fly   427 ELLYTATKATPYAGQKLRGVVHATVVRGLHVYQQFEG---FGQPLGKVLLRR 475
            :...:|.:...:.|.:.||.....:.:|..||:  :|   ..|.:|:.:.|:
 Frog   531 KTHKSAVEYNIFEGMECRGAPLMVISQGKIVYE--DGNLHVNQGMGRFIPRK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6106NP_001285403.1 L-HYD_ALN 2..473 CDD:238640 125/503 (25%)
crmp1NP_001072314.1 D-HYD 125..574 CDD:238639 123/496 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D719800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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