DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6106 and dpysl3

DIOPT Version :9

Sequence 1:NP_001285403.1 Gene:CG6106 / 32816 FlyBaseID:FBgn0030914 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001018348.1 Gene:dpysl3 / 553166 ZFINID:ZDB-GENE-050720-2 Length:567 Species:Danio rerio


Alignment Length:485 Identity:114/485 - (23%)
Similarity:195/485 - (40%) Gaps:94/485 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SQNALIHGGIIVD-----------TEGIIRRV---LRSPQEVNTYLYNTESESVYDFGDLVLMPG 66
            |:..||.||.||:           .:|:|:::   |..|..|.|...|         |.:|: ||
Zfish    14 SERLLIKGGRIVNDDQSFYADIYMEDGVIKQIGDNLIVPGGVKTIEAN---------GKMVI-PG 68

  Fly    67 LIDPNVHINEP--GRKDWEGFATATKAAAAGGFTTIIDRPTNAQPPTVSVAHLKA---------K 120
            .||.:.|:..|  |....:.|...||||.|||.|.|:|...    |....:.|:|         :
Zfish    69 GIDIHTHLQMPFRGTTTADDFTQGTKAALAGGTTMIVDHVI----PEPGCSLLEAFDRWSKWADE 129

  Fly   121 TSTARGKIYVDVGFWGGLVPGNGDQLAALLGAGVMGLQCTLCDPAAPVSQEFPAVNESQLEEALS 185
            .:.....::||:..|...|....:.|  :...||...|..:      ..::...::.::|.|..:
Zfish   130 KACCDYSLHVDITHWNDSVKQEVETL--IKEKGVNSFQVYM------AFKDLYQMSNTELYEVFT 186

  Fly   186 QLDKDQAEGEAIVAVHAELPLTTEIHPDEEAPR-EYGT-----FLVTRPPQMEISATQLLCRLAN 244
            .|    .|...|..||||   ..||..:|:|.. |.|.     .:::||.::|..|......:|:
Zfish   187 FL----GEHGGIAQVHAE---NGEIIAEEQARMLEMGITGPEGHVLSRPEELEAEAVFRAVTIAS 244

  Fly   245 RHPRRC-IHILNCSSGESLPLVEECRRQG---------GNLTVDTCPHY----LALAAEDVPDCG 295
            :  ..| :::....|..:..::.:.|::|         .:|..|. .||    .|.||       
Zfish   245 Q--TNCPLYVTRVMSKSAADIISQARKKGNVVFGEPITASLGTDG-THYWSKNWAKAA------- 299

  Fly   296 TEFKTWPPIRERRNQEQLWQALRPGGAIRMIGSDHSPATPGARALTCGRGRGNFLKAWPGINSLQ 360
             .|.|.||:............|...|.:.::||.|...:...:|:    |:.:|.:...|:|..:
Zfish   300 -SFVTSPPLSPDPTTPDYLNTLLASGDLSVVGSAHCTFSVAQKAI----GKDDFTQIPEGVNGAE 359

  Fly   361 LSLSVVW-TAAANRRGSANLTIADIHRLMCQEPANLCGLSASKGRIAEGYDADFCVWSPEEEFTV 424
            ..:|::| .|....:...|:.:|    :.....|.:..|...|||||.|.|:|..:|..:...|:
Zfish   360 ERMSIIWDKAVVTGKMDENMFVA----VTSTNAAKILNLYPRKGRIAVGSDSDLVIWDTDAVRTI 420

  Fly   425 GPELLYTATKATPYAGQKLRGVVHATVVRG 454
            ..:..::|.:...:.|.:|||.....|.:|
Zfish   421 TAKTHHSAAEYNVFEGMELRGAPMLVVCQG 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6106NP_001285403.1 L-HYD_ALN 2..473 CDD:238640 114/485 (24%)
dpysl3NP_001018348.1 PRK09060 17..467 CDD:181632 113/482 (23%)
D-HYD 17..466 CDD:238639 113/482 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 505..567
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D719800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.