DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6106 and Crmp1

DIOPT Version :9

Sequence 1:NP_001285403.1 Gene:CG6106 / 32816 FlyBaseID:FBgn0030914 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001129530.1 Gene:Crmp1 / 12933 MGIID:107793 Length:686 Species:Mus musculus


Alignment Length:527 Identity:134/527 - (25%)
Similarity:211/527 - (40%) Gaps:129/527 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SQNALIHGGIIVD-----------TEGIIRRV---LRSPQEVNTYLYNTESESVYDFGDLVLMPG 66
            |...||.||.|::           .:|:|:::   |..|..|.|...|         |.:|: ||
Mouse   128 SDRLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVPGGVKTIEAN---------GRMVI-PG 182

  Fly    67 LIDPNVHINEP--GRKDWEGFATATKAAAAGGFTTIID----RPTNAQPPTVSVAHLKAKT-STA 124
            .||.|.::.:|  |....:.|...||||.|||.|.|||    .|.::...:....|..|.| |..
Mouse   183 GIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC 247

  Fly   125 RGKIYVDVGFWGGLVPGNGDQLAALL-GAGVMGLQCTLCDPAAPVSQEFPAVNESQLEEALSQLD 188
            ...::||:..|   ..|..::|..|: ..||...|..:      ..::...:::|||.||.:.| 
Mouse   248 DYSLHVDITSW---YDGVREELEVLVQDKGVNSFQVYM------AYKDLYQMSDSQLYEAFTFL- 302

  Fly   189 KDQAEG-EAIVAVHAE---LPLTTEIHPDEEAPREYGT-----FLVTRPPQMEISATQLLCRLAN 244
                :| .|::.||||   |     |..:::...|.|.     ..::||.::|..|......:|.
Mouse   303 ----KGLGAVILVHAENGDL-----IAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAG 358

  Fly   245 RHPRRC-IHILNCSSGESLPLVEECRRQG---------GNLTVDTCPHY----LALAAEDVPDCG 295
            |  ..| ::|....|..:..::...|::|         .:|..|. .||    .|.||       
Mouse   359 R--INCPVYITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDG-THYWSKNWAKAA------- 413

  Fly   296 TEFKTWPPIRERRNQEQLWQALRPGGAIRMIGSDHSPATPGARALTCGRGRGNFLKAWPGINSLQ 360
             .|.|.||:...........:|...|.:::.||.|.|.:...:|:    |:.||.....|:|.::
Mouse   414 -AFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAV----GKDNFTLIPEGVNGIE 473

  Fly   361 LSLSVVW-TAAANRRGSANLTIADIHRLMCQEPANLCGLSASKGRIAEGYDADFCVWSPEEEFTV 424
            ..::||| .|.|..:...|..:|    :.....|.:..|...|||||.|.|||..:|.|::..|:
Mouse   474 ERMTVVWDKAVATGKMDENQFVA----VTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTI 534

  Fly   425 GPELLYTATKATPYAGQKLRGVVHATVVRGLHVYQQFEGF---GQPL-----GKVLLRRS----S 477
                  ||..             |.:.|.    |..|||.   |.||     ||::....    |
Mouse   535 ------TAKS-------------HKSTVE----YNIFEGMECHGSPLVVISQGKIVFEDGNISVS 576

  Fly   478 RKLVKFV 484
            :.:.:|:
Mouse   577 KGMGRFI 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6106NP_001285403.1 L-HYD_ALN 2..473 CDD:238640 132/510 (26%)
Crmp1NP_001129530.1 D-HYD 131..580 CDD:238639 132/519 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D719800at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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