DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hesr and her4.4

DIOPT Version :10

Sequence 1:NP_525094.1 Gene:Hesr / 32800 FlyBaseID:FBgn0030899 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001121862.1 Gene:her4.4 / 100149066 ZFINID:ZDB-GENE-081031-104 Length:152 Species:Danio rerio


Alignment Length:149 Identity:32/149 - (21%)
Similarity:58/149 - (38%) Gaps:43/149 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KPMMERKRRSRINRCLDFIKDLLQEVSHLDGETMAKMDMGDVLELAVHHL--SKKN--------- 79
            |||:|:.||.|||..::.:|.||.: ..:..:..::.:..|:||:.:..|  |:|:         
Zfish    22 KPMVEKIRRERINSSIEKLKTLLAQ-EFVKQQPDSRQEKADILEMTLDFLRRSQKSSAAGDGRSR 85

  Fly    80 -----------CPVATPTTAPTSGVY---QSPIDCYWSGFRECVLEVSQFLQHNGYQPSFEFAKE 130
                       |||.|.:......::   |:|.|                 ||..........|.
Zfish    86 CVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPAD-----------------QHTRVDNPQTTEKH 133

  Fly   131 LDHLVASTSKSKPNLWRPW 149
            .:......:.::.::||||
Zfish   134 ANSSAKQHTPARSHIWRPW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HesrNP_525094.1 bHLH_SF 16..77 CDD:469605 16/52 (31%)
Hairy_orange 101..>116 CDD:470640 0/14 (0%)
her4.4NP_001121862.1 bHLH-O_HES5 19..77 CDD:381467 18/55 (33%)
ORANGE 77..123 CDD:128787 9/62 (15%)

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