DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and Kcnip1

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_017170240.1 Gene:Kcnip1 / 70357 MGIID:1917607 Length:249 Species:Mus musculus


Alignment Length:182 Identity:78/182 - (42%)
Similarity:120/182 - (65%) Gaps:7/182 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFD 73
            :.:.:::|...|.||::|::..::||..:||:|::.|:.|.:||.||||.||.|.:|..:|..||
Mouse    64 RPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFD 128

  Fly    74 ENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITRE----EMYNIVDAIYQMVGQ 134
            ....|:::||:|:.||||..||.:.|||.|.|.|||::.||||.:|    ||.:||.|||.|:|:
Mouse   129 TTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEVPFQEMMDIVKAIYDMMGK 193

  Fly   135 --QPQTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
              .|..: |:||::.||..|.:||||.|..:||:||.|..:.|..|:::|.|
Mouse   194 YTYPVLK-EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 75/174 (43%)
Kcnip1XP_017170240.1 FRQ1 68..238 CDD:227455 75/170 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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