Protein Alignment Frq2 and rcvrna

DIOPT Version :10

• Sequence 1: NP_525093.1
• Gene: Frq2 / 32799
• FlyBaseID: FBgn0083228
• Length: 187
• Species: Drosophila melanogaster
• Sequence 2: NP_001025419.1
• Gene: rcvrna / 570333
• ZFINID: ZDB-GENE-050913-106
• Length: 203
• Species: Danio rerio
• Alignment Length: 187
• Identity: 80/187 - (42%)
• Similarity: 119/187 - (63%)
• Gaps: 7/187 - (3%)

  Fly     1 MGK-KNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKF 64
            ||. |:..|.::.::.|..:|.:||:|:..|:..|||:||:|.:|::.|..||..||||.||:.:
Zfish     1 MGNTKSGALSKELLEDLKLNTKYTEEELCAWYTSFLKECPSGRITKEQFEGIYASFFPDADPTAY 65

  Fly    65 ASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIY 129
            |..|||.||.|.||.::|:|:|.||.:||.|....||.|||.|||||.:|.|::.|:..||.:|:
Zfish    66 ARHVFRSFDTNADGTLDFKEYIVALHLTSSGKTLRKLEWAFALYDVDGNGTISKNEVQEIVRSIF 130

  Fly   130 QMVGQQPQ---TEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREG---SKADPRIVQ 180
            .||..:.|   .:|||||:||.|||:....|..:|::...||.:|   :|...|::|
Zfish   131 NMVPVEDQKNLPDDENTPEKRADKIWAFFGKQDNDKIGEGEFIQGVMENKDILRLIQ 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Frq2	NP_525093.1	FRQ1	<69..173	CDD:444056	49/109 (45%)
rcvrna	NP_001025419.1	FRQ1	41..178	CDD:444056	62/136 (46%)
		EFh	65..127	CDD:238008	31/61 (51%)