DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and hpcal4

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001108159.1 Gene:hpcal4 / 564909 ZFINID:ZDB-GENE-060503-307 Length:191 Species:Danio rerio


Alignment Length:185 Identity:106/185 - (57%)
Similarity:137/185 - (74%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFA 65
            |||.||||..:.:|.||..|.|.|.|::||:||||||||:|:|..:.|.::|.:|||.||.||||
Zfish     1 MGKHNSKLAPEVLDDLTKSTEFNEAELKQWYKGFLKDCPSGILNLEEFQQLYVKFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ...||.||:|.||.|:|.|||.||||||||:.::||:|||.:||:|.||.|||.||..|::|||:
Zfish    66 QHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRMEMLEIIEAIYK 130

  Fly   131 MVG---QQPQTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182
            |||   .....||..|||:||||||.:|||:|:|.::||||:|.:|:||.||..|
Zfish   131 MVGTVIMMRMNEDGLTPQQRVDKIFSKMDKDHNDEISLEEFKEAAKSDPSIVLLL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 63/106 (59%)
hpcal4NP_001108159.1 FRQ1 40..177 CDD:444056 76/136 (56%)

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