DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and efcab1

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001038325.1 Gene:efcab1 / 558421 ZFINID:ZDB-GENE-040914-40 Length:216 Species:Danio rerio


Alignment Length:185 Identity:59/185 - (31%)
Similarity:92/185 - (49%) Gaps:25/185 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDT-YFTEKEIRQWHKGFLKDCPNGLLTEQG------------FIKIY 52
            |...|.||.|:..:.|.... :|.:.|.....:.|     |.||.||.            |..|.
Zfish     4 MSAMNRKLIQNLAETLCRQVKHFNKTETECLIRLF-----NSLLGEQAERKTTIGVDRAKFRNIL 63

  Fly    53 KQFFPDGDPSKFASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYIT 117
            ...|...| ......|.||.|::|||.:..:|::.|||:..||.||||:.:.|.:||::.||||:
Zfish    64 HHTFGMTD-DMMTDRVCRVIDKDNDGYLSVKEWVEALSVFLRGTLDEKMKYCFEVYDLNGDGYIS 127

  Fly   118 REEMYNIV-DAIYQMVGQQPQTEDENTPQKRVDKI-FDQMDKNHDDRLTLEEFRE 170
            ||||:.:: |::.    :||..||.:...|.:.:| ..:||.:||.|::..:|.:
Zfish   128 REEMFQMLKDSLI----RQPTEEDPDEGIKDIVEIALKKMDYDHDGRVSYADFEK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 55/177 (31%)
efcab1NP_001038325.1 EFh 80..136 CDD:238008 27/55 (49%)
EF-hand_7 80..135 CDD:290234 27/54 (50%)
EFh 110..176 CDD:238008 24/69 (35%)
EF-hand_7 111..178 CDD:290234 24/70 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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