DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and 1700109H08Rikl

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_006236139.1 Gene:1700109H08Rikl / 500007 RGDID:1588445 Length:217 Species:Rattus norvegicus


Alignment Length:152 Identity:39/152 - (25%)
Similarity:81/152 - (53%) Gaps:8/152 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LKDCP-----NGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFDENNDGAIEFEEFIRALSITSR 94
            |..||     |..|....|..:.:.||...: ....:.||.|||::.|..:..:|:|:.|::..|
  Rat    35 LAGCPIGKVDNTKLDCNAFRGVLQNFFGMTN-DVLMNRVFFVFDKDGDSHVNLQEWIKGLAVFLR 98

  Fly    95 GNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDENTPQKRVDKIFDQMDKNH 159
            |..:||:.:.|.:|.:..|.||:||::::::.:  .:....|:.|:|...:..|:....:||.::
  Rat    99 GTFEEKMRFCFEVYYLSGDAYISREKIFDMLKS--SLFHNSPEEENEEGIKDLVEISLKKMDYDN 161

  Fly   160 DDRLTLEEFREGSKADPRIVQA 181
            |.:::.|:|.:..:.|..:::|
  Rat   162 DGKISFEDFEKAVRKDGLLLEA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 28/103 (27%)
1700109H08RiklXP_006236139.1 FRQ1 <66..176 CDD:444056 29/111 (26%)

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