DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and rcvrn.2

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001008164.1 Gene:rcvrn.2 / 493526 XenbaseID:XB-GENE-5807318 Length:193 Species:Xenopus tropicalis


Alignment Length:186 Identity:73/186 - (39%)
Similarity:114/186 - (61%) Gaps:4/186 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGK-KNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKF 64
            ||. |:..|.::.::.|..:|.:::.|:.:|::.|.|..|||.:|...|.|||..|||:.||..:
 Frog     1 MGNTKSGALSKEVLEDLKANTRYSDDELCKWYESFSKQSPNGKITRTEFEKIYANFFPNSDPKSY 65

  Fly    65 ASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIY 129
            |..|||.||.|.||.::|.|:|.||.:||.|....||.|||.|:|||.:|.|::.|:..|:.||:
 Frog    66 ARHVFRSFDTNEDGTLDFREYIIALHLTSSGKTSLKLEWAFSLFDVDKNGEISKVEVLEIITAIF 130

  Fly   130 QMVGQQPQ---TEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182
            :|:..:.|   .:||||||||.||::....|:.|.::...||.:|...:..|::.:
 Frog   131 KMIPPEEQKNLADDENTPQKRADKLWAYFKKSDDAKIAEGEFIQGIMMNDEIMRLI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 47/106 (44%)
rcvrn.2NP_001008164.1 FRQ1 41..177 CDD:444056 61/135 (45%)
EFh 65..127 CDD:238008 30/61 (49%)

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