DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and CanB

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_524741.1 Gene:CanB / 44317 FlyBaseID:FBgn0010014 Length:170 Species:Drosophila melanogaster


Alignment Length:171 Identity:55/171 - (32%)
Similarity:88/171 - (51%) Gaps:21/171 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLK-DCPN-GLLTEQGFIKIYKQFFPDGDPSK 63
            ||.:.| |..|.......|      |||:..|.|.| |..| |.|:...|:.:     |:...:.
  Fly     1 MGNETS-LPMDMCSNFDAD------EIRRLGKRFRKLDLDNSGALSIDEFMSL-----PELQQNP 53

  Fly    64 FASLVFRVFDENNDGAIEFEEFIRALS-ITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDA 127
            ....|..:||.:.:|.::|:|||:.:| .:.||:...||.:|||:||:||||||:..|::.:   
  Fly    54 LVQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQV--- 115

  Fly   128 IYQMVGQQPQTEDENTPQKRVDKIFDQMDKNHDDRLTLEEF 168
            :..|||...:   :...|:.|||.....||:.|.:::.:||
  Fly   116 LKMMVGNNLK---DTQLQQIVDKTICFADKDEDGKISFDEF 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 36/101 (36%)
CanBNP_524741.1 FRQ1 20..157 CDD:444056 48/145 (33%)

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