DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and hpca

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_957017.1 Gene:hpca / 393696 ZFINID:ZDB-GENE-040426-1683 Length:193 Species:Danio rerio


Alignment Length:183 Identity:108/183 - (59%)
Similarity:138/183 - (75%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFA 65
            |||:||||:.:.:..|..:|.||:.|:::|:||||||||:|.|..:.|.|||..|||.||.||||
Zfish     1 MGKQNSKLRPEMLQDLRENTEFTDHELQEWYKGFLKDCPSGHLNVEEFKKIYANFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ..|||.||.||||.|:|.|||.|||:||||.|::||.|||.:||:|.:|||:||||..||.|||:
Zfish    66 EHVFRTFDTNNDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISREEMLEIVQAIYK 130

  Fly   131 MVGQ-QPQTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182
            ||.. ....|||:||:||.||||.|||.|:|.:|:||||.:|:|:||.||:.|
Zfish   131 MVSSVMKMPEDESTPEKRTDKIFRQMDLNNDGKLSLEEFIKGAKSDPSIVRLL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 65/104 (63%)
hpcaNP_957017.1 FRQ1 21..175 CDD:444056 93/153 (61%)

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