DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and rcvrn2

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_956258.1 Gene:rcvrn2 / 335650 ZFINID:ZDB-GENE-030131-7590 Length:193 Species:Danio rerio


Alignment Length:175 Identity:75/175 - (42%)
Similarity:118/175 - (67%) Gaps:4/175 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGK-KNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKF 64
            ||. |:|.:.::.::.|..:|.|:|.|:.||::.|.|.||:|.:|.:.|.|||::|||:.|.:.:
Zfish     1 MGNAKSSAMSKEILEDLKLNTKFSENELSQWYENFQKQCPSGRITPEEFKKIYERFFPECDTTSY 65

  Fly    65 ASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIY 129
            |..|||.||.|:||.::|:|:|.||.:||.|..:.||.|||.|:|||.:||||:.|:..|..||:
Zfish    66 AQHVFRSFDTNDDGTLDFKEYIIALHMTSTGKTERKLEWAFSLFDVDKNGYITKSEVAEICQAIF 130

  Fly   130 QMVGQQPQTE---DENTPQKRVDKIFDQMDKNHDDRLTLEEFREG 171
            :::.::.|..   |||||:||.||::...:|..::||...||.:|
Zfish   131 KLIPKEDQESLPADENTPEKRADKLWSYFNKKDNERLAEGEFIQG 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 48/106 (45%)
rcvrn2NP_956258.1 FRQ1 41..176 CDD:444056 60/135 (44%)
EFh 65..125 CDD:238008 31/59 (53%)

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