DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq2 and CG2256

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster


Alignment Length:210 Identity:55/210 - (26%)
Similarity:96/210 - (45%) Gaps:41/210 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GKKNSKLKQDTIDRLTTDTYFTEKEI----RQWHKGFLKDC---PNGLLTEQGFIKIYKQFFPDG 59
            ||.|.||    :|.|...|.||:.|:    |.:.| .:.:|   ...|.:......|.|   |..
  Fly   106 GKVNPKL----LDSLRKKTRFTKDELDALCRIYRK-LVSNCQYAAKTLASSSSSAAIAK---PHA 162

  Fly    60 DPSKFASLVF------------------RVF---DENNDG-AIEFEEFIRALSITSRGNLDEKLH 102
            .......:||                  |:|   |:.::| .:..|.::..||...||...|:..
  Fly   163 AVEGIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAA 227

  Fly   103 WAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDENTPQK-RVDKIFDQMDKNHDDRLTLE 166
            :.||:||::.||:||::||:.:   :...:.:|||.||.:...| .|:.:..:.|.:.|.:::||
  Fly   228 FCFRVYDLNTDGFITKDEMFTL---LRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289

  Fly   167 EFREGSKADPRIVQA 181
            :|.....|:|.:::|
  Fly   290 DFMGTVTAEPLLIEA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 33/126 (26%)
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 50/194 (26%)
EF-hand_7 224..292 CDD:463900 22/70 (31%)

Return to query results.
Submit another query.