DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and ncs1

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_592879.1 Gene:ncs1 / 2542523 PomBaseID:SPAC18B11.04 Length:190 Species:Schizosaccharomyces pombe


Alignment Length:185 Identity:115/185 - (62%)
Similarity:141/185 - (76%) Gaps:1/185 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFA 65
            |||..|||.||.:..|...|.|.:||::||:|||.||||:|.|.:..|.||||||||.||||.||
pombe     1 MGKSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFA 65

  Fly    66 SLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ..||.|||.:.:|.|:|:|||.|||:||||.|::||.|||:|||:||:|.|:.:||..||||||:
pombe    66 EYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130

  Fly   131 MVGQQPQ-TEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
            |||...: .|||:||:|||:|||:.||||.|.:||||||.||||.||.||.||||
pombe   131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 103/169 (61%)
ncs1NP_592879.1 FRQ1 9..179 CDD:227455 103/169 (61%)
EFh <36..86 CDD:298682 30/49 (61%)
EFh 65..125 CDD:238008 34/59 (58%)
EFh 100..172 CDD:238008 45/71 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5719
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100764
Panther 1 1.100 - - LDO PTHR23055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R801
SonicParanoid 1 1.000 - - X31
TreeFam 1 0.960 - -
109.800

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