DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and Vsnl1

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_036818.2 Gene:Vsnl1 / 24877 RGDID:3966 Length:191 Species:Rattus norvegicus


Alignment Length:185 Identity:103/185 - (55%)
Similarity:135/185 - (72%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFA 65
            |||:||||..:.::.|...|.|.|.|::||:||||||||:|.|..:.|.::|.:|||.||.||||
  Rat     1 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFA 65

  Fly    66 SLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQ 130
            ...||.||:|.||.|:|.|||.||||||||:.::||:|.|.:||:|.||.|||.||..|::|||:
  Rat    66 QHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWVFNMYDLDGDGKITRVEMLEIIEAIYK 130

  Fly   131 MVG---QQPQTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182
            |||   .....||..||::||||||.:||||.||::||:||:|.:|:||.||..|
  Rat   131 MVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPSIVLLL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 62/106 (58%)
Vsnl1NP_036818.2 FRQ1 21..177 CDD:444056 88/155 (57%)

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