DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and ncs-5

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001256829.1 Gene:ncs-5 / 183792 WormBaseID:WBGene00008307 Length:288 Species:Caenorhabditis elegans


Alignment Length:163 Identity:37/163 - (22%)
Similarity:72/163 - (44%) Gaps:10/163 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFF-PDGDPSKFASLVFRVFDEN 75
            ::::||..|.|:.|.|:..:..|..:.|.|.:.|:.|..:..... |:....::.|.:|..|...
 Worm    97 SLEQLTQRTQFSPKWIKYMYAKFKNESPTGKMKEEEFRNLLASIIAPEKATDQYISRLFTAFAGV 161

  Fly    76 NDGAIEFEEFIRALSITSRGNLDEKLHWAFRLY----DVDNDGYITREEMYNIVDAIYQMVGQQP 136
            :...|.||..:.:||.......:....|..||.    :.|..||   ....:...:::|:...:.
 Worm   162 DKKTITFENLLDSLSHVQPQTAETNAKWTMRLITGGGEGDCFGY---SAFLDFTQSVFQLNEGKS 223

  Fly   137 QTEDEN--TPQKRVDKIFDQMDKNHDDRLTLEE 167
            ..|:.|  :.|:|..|||.::|.:.|..:|.::
 Worm   224 GGEEINKESVQQRATKIFAELDCDRDGLVTYDD 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 24/105 (23%)
ncs-5NP_001256829.1 EFh_PI-PLC <106..211 CDD:333715 23/107 (21%)
EF-hand motif 111..140 CDD:320029 6/28 (21%)
EF-hand motif 144..179 CDD:320029 8/34 (24%)
EF-hand motif 186..211 CDD:320029 6/27 (22%)

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