DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and ncs-7

DIOPT Version :10

Sequence 1:NP_525093.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001360662.1 Gene:ncs-7 / 182694 WormBaseID:WBGene00015867 Length:239 Species:Caenorhabditis elegans


Alignment Length:182 Identity:54/182 - (29%)
Similarity:100/182 - (54%) Gaps:13/182 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFDENN 76
            :||.|...|.|:::||:|.::.|.:..|.|.:..:.|..||...||:||...:|.|||:..|:|.
 Worm    55 SIDYLIEITNFSKREIQQLYRSFKELWPIGTVDLEQFQLIYASIFPNGDSKGYAELVFKNIDQNR 119

  Fly    77 DGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQTEDE 141
            .|.:.|.:||...|..::|.|||:|.|.|.|||.:..|::...|::::|.::|||:      :..
 Worm   120 VGTVTFLDFITNYSKIAKGTLDERLDWIFTLYDTNRCGFLAYNEIFHVVKSMYQMM------DSS 178

  Fly   142 NTP-------QKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSLGG 186
            ..|       ::.|..:|..::..::.:::..||.:..::|..|:.::.|.|
 Worm   179 LKPAVLATICRQHVKIVFKNLNIANNGKVSKAEFLQRCRSDSDILASMELFG 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_525093.1 FRQ1 <69..173 CDD:444056 29/110 (26%)
ncs-7NP_001360662.1 FRQ1 84..218 CDD:444056 40/139 (29%)

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