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Protein Alignment Frq2 and Rcvrn
DIOPT Version :9
Sequence 1: | NP_001259675.1 |
Gene: | Frq2 / 32799 |
FlyBaseID: | FBgn0083228 |
Length: | 187 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_543177.2 |
Gene: | Rcvrn / 140936 |
RGDID: | 620258 |
Length: | 202 |
Species: | Rattus norvegicus |
Alignment Length: | 188 |
Identity: | 83/188 - (44%) |
Similarity: | 126/188 - (67%) |
Gaps: | 8/188 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MG-KKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKF 64
|| .|:..|.::.::.|..:|.|||:|:..|::.|||:||:|.:|.|.|..||.:||||.||..:
Rat 1 MGNSKSGALSKEILEELQLNTKFTEEELSAWYQSFLKECPSGRITRQEFESIYSKFFPDSDPKAY 65
Fly 65 ASLVFRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIY 129
|..|||.||.|:||.::|:|::.||.:|:.|...:||.|||.|||||.:|.|::.|:..||.||:
Rat 66 AQHVFRSFDANSDGTLDFKEYVIALHMTTAGKPTQKLEWAFSLYDVDGNGTISKNEVLEIVMAIF 130
Fly 130 QMVGQQPQ-----TEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQAL 182
:|: :|: .:|||||:||.:||:....|..||:||.|||.||:.|:..|::.:
Rat 131 KMI--KPEDVKNLPDDENTPEKRAEKIWAFFGKKDDDKLTEEEFIEGTLANKEILRLI 186
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Frq2 | NP_001259675.1 |
FRQ1 |
9..178 |
CDD:227455 |
78/173 (45%) |
Rcvrn | NP_543177.2 |
FRQ1 |
14..182 |
CDD:227455 |
78/169 (46%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0044 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D495747at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.820 |
|
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