DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq2 and Guca1b

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_036016150.1 Gene:Guca1b / 107477 MGIID:1194489 Length:230 Species:Mus musculus


Alignment Length:169 Identity:59/169 - (34%)
Similarity:97/169 - (57%) Gaps:25/169 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFP---DGDPSKFASLVFRVFDENNDGAIEFEEFIR 87
            |:::|:|.|:.:||:|.|    |:..:|:||.   :.:.|::...:||.||:|.|..|:|.|::.
Mouse    20 ELQEWYKKFVVECPSGTL----FMHEFKRFFKVTGNEEASQYVESMFRAFDKNGDNTIDFLEYVA 80

  Fly    88 ALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQM---------VGQQPQTEDENT 143
            ||::..||:|:.||.|.|::||.|.:|.|.|.|:.:||:|||::         :..|.|.   .|
Mouse    81 ALNLVLRGSLEHKLKWTFKIYDKDRNGCIDRLELLDIVEAIYKLKKACRAELDLEHQGQL---LT 142

  Fly   144 PQKRVDKIFDQMDKNHDD------RLTLEEFREGSKADP 176
            |::.||:||..:|:|.|.      |.|....|..|:..|
Mouse   143 PEEVVDRIFLLVDENGDGKRDAVCRETALSVRYASQKSP 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 59/169 (35%)
Guca1bXP_036016150.1 FRQ1 15..161 CDD:227455 54/147 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495747at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.