DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and kcnip4a

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_021333732.1 Gene:kcnip4a / 100536963 ZFINID:ZDB-GENE-131003-3 Length:230 Species:Danio rerio


Alignment Length:178 Identity:73/178 - (41%)
Similarity:123/178 - (69%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFD 73
            :.:.:::|...|.|:.||::..::||..:||:|::.|..|.:||.||||.||.|.:|..:|..||
Zfish    49 RPEALEQLEAQTRFSRKELQILYRGFKNECPSGVVNEDTFKEIYAQFFPQGDASTYAHFLFNAFD 113

  Fly    74 ENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--QP 136
            .:::|::.||:|:..|||..||::.|||:|||.|||::.|||||:|||.:|:.:||.|:|:  .|
Zfish   114 TDHNGSVSFEDFVMGLSILLRGSVQEKLNWAFNLYDINKDGYITKEEMLDIIKSIYDMMGKCTYP 178

  Fly   137 QTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
            ..::| ||::.|:..|.:||||.|..:|::||.:..:.|..|::::.|
Zfish   179 ILKEE-TPRQHVEIFFQKMDKNRDGVVTIDEFIDCCQNDENIMRSMQL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 71/170 (42%)
kcnip4aXP_021333732.1 FRQ1 53..219 CDD:227455 71/166 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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