DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and kcnip1

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002937770.1 Gene:kcnip1 / 100497014 XenbaseID:XB-GENE-973728 Length:230 Species:Xenopus tropicalis


Alignment Length:178 Identity:73/178 - (41%)
Similarity:116/178 - (65%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFD 73
            :.:.:::|...|.|.::|::..::||..:||:|::.|..|..||.||||.||.|.:|..:|..||
 Frog    49 RPEGLEQLEAQTNFNKRELQVLYRGFKNECPSGVVNEDTFKLIYSQFFPHGDASMYAHYLFNAFD 113

  Fly    74 ENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--QP 136
            ....|:::||:|:.|||:..||::.|||.|.|.|||::.||.|.:|||.:||.|||.|:|:  .|
 Frog   114 AAQSGSVKFEDFVAALSVLLRGSIHEKLRWTFNLYDINKDGNINKEEMMDIVKAIYDMMGKYTYP 178

  Fly   137 QTEDENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
            ..: |:.|::.|:..|.:||||.|..:||:||.|..:.|..|:::|.|
 Frog   179 VLK-EDAPKQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 70/170 (41%)
kcnip1XP_002937770.1 FRQ1 53..219 CDD:227455 70/166 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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