DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and guca1b

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002933553.1 Gene:guca1b / 100489509 XenbaseID:XB-GENE-22172599 Length:197 Species:Xenopus tropicalis


Alignment Length:191 Identity:63/191 - (32%)
Similarity:113/191 - (59%) Gaps:23/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKNSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFA 65
            :.:::||::.|.            .|:::|:|.|:.:||:|.|    |:..:|:||...|..:.|
 Frog     5 LSEESSKVEIDV------------AELQEWYKKFVVECPSGTL----FMHEFKRFFGVADNQEAA 53

  Fly    66 SLV---FRVFDENNDGAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDA 127
            ..|   ||.||:|.|..|:|.|::.||::..||.|:.||.|.|::||.|.:|.|.:.|:..||::
 Frog    54 DYVEHMFRAFDKNGDNTIDFLEYVAALNLVLRGKLEHKLKWTFKVYDRDGNGCIDKAELLEIVES 118

  Fly   128 IYQMVGQQPQTEDENT----PQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
            ||.:.....:.:||.|    |::.|::||..:|:|.|.:|:|:||.:|::.|..:::.|.:
 Frog   119 IYNLKKVCRRGQDERTPLLSPEEVVERIFQLVDENGDGQLSLDEFVDGARKDKWVMKMLQM 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 60/175 (34%)
guca1bXP_002933553.1 FRQ1 1..166 CDD:227455 60/176 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495747at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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