DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq2 and kcnip3

DIOPT Version :9

Sequence 1:NP_001259675.1 Gene:Frq2 / 32799 FlyBaseID:FBgn0083228 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001107403.1 Gene:kcnip3 / 100135241 XenbaseID:XB-GENE-982010 Length:259 Species:Xenopus tropicalis


Alignment Length:174 Identity:75/174 - (43%)
Similarity:115/174 - (66%) Gaps:3/174 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPDGDPSKFASLVFRVFDENND 77
            :::|...|.||.||::..::||..:||:||:.|:.|..||.||||.||.:.:|..:|..||.:.:
 Frog    82 LEQLQAQTQFTRKELQSLYRGFKNECPSGLVDEETFKSIYSQFFPQGDATTYAHFLFNAFDMDRN 146

  Fly    78 GAIEFEEFIRALSITSRGNLDEKLHWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--QPQTED 140
            |:|.||:|:..||:..||::.|||.|||.|||::.|||||:|||..|:.:||.|:|:  .|..:|
 Frog   147 GSIRFEDFVIGLSVLLRGSVTEKLRWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRYTSPCVKD 211

  Fly   141 ENTPQKRVDKIFDQMDKNHDDRLTLEEFREGSKADPRIVQALSL 184
            : ...:.|:|.|.:||:|.|..:|||||.|..:.|..|:.::.|
 Frog   212 D-AAFEHVEKFFQKMDRNRDGVVTLEEFIETCQKDENIMSSMQL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq2NP_001259675.1 FRQ1 9..178 CDD:227455 73/166 (44%)
kcnip3NP_001107403.1 FRQ1 82..248 CDD:227455 73/166 (44%)
EF-hand_8 108..155 CDD:290545 21/46 (46%)
EFh 133..195 CDD:238008 31/61 (51%)
EFh 169..240 CDD:238008 35/71 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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