DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and EFCAB1

DIOPT Version :9

Sequence 1:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_078869.1 Gene:EFCAB1 / 79645 HGNCID:25678 Length:211 Species:Homo sapiens


Alignment Length:189 Identity:56/189 - (29%)
Similarity:98/189 - (51%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KKSSKLKQDTIDRLTTD-TYFTEKEIRQWHKGFLKDCPNGL--------LTEQGFIKIYKQFFPQ 58
            ||..||    .|.||.: .:|.:.|:....|.|. |...|:        |....|..|....|..
Human     4 KKLQKL----TDTLTKNCKHFNKFEVNCLIKLFY-DLVGGVERQGLVVGLDRNAFRNILHVTFGM 63

  Fly    59 GDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYN 123
            .| ......|||.||::|||.:...|:|..||:..:|:|:||:::.|.::|::.||:|::|||::
Human    64 TD-DMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFH 127

  Fly   124 IVDAIYQMVGQQPQSEDENTPQKRVDKI-FDQMDKNHDGKLTLEEFREGSKADPRIVQA 181
            :   :...:.:||..||.:...|.:.:| ..:||.:|||||:..::....:.:..:::|
Human   128 M---LKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 51/178 (29%)
EFCAB1NP_078869.1 EFh_PEF <48..170 CDD:330173 42/125 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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