DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Kcnip3

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001277934.1 Gene:Kcnip3 / 56461 MGIID:1929258 Length:284 Species:Mus musculus


Alignment Length:187 Identity:76/187 - (40%)
Similarity:119/187 - (63%) Gaps:8/187 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SKLKQDTI-------DRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSK 63
            |:|:..|:       |:|...|.||:||::..::||..:||.||:.|..|..||.|||||||.:.
Mouse    93 SELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATT 157

  Fly    64 FASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAI 128
            :|..:|..||.:.:|:|.||:|:..||:..:|.:.|||:|||.|||::.||.||:|||..|:.:|
Mouse   158 YAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 222

  Fly   129 YQMVGQQPQS-EDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            |.|:|:.... ..|:.|.:.|::.|.:||:|.||.:|::||.|..:.|..|:.::.|
Mouse   223 YDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQL 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 23/49 (47%)
FRQ1 <69..173 CDD:444056 45/104 (43%)
Kcnip3NP_001277934.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..57
FRQ1 135..269 CDD:444056 59/133 (44%)
Blue background indicates that the domain is not in the aligned region.

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