DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and si:ch211-245j22.3

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001074270.2 Gene:si:ch211-245j22.3 / 563798 ZFINID:ZDB-GENE-050419-38 Length:194 Species:Danio rerio


Alignment Length:168 Identity:60/168 - (35%)
Similarity:103/168 - (61%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQG----DPSKFASLVFRVFDENNDGSI 80
            ||.|  |:.:|.:.||.:||:||:|    :..:::.|..|    :.:::|..:||..|.|.||.:
Zfish    14 TYVT--ELYEWFRKFLNECPSGLIT----LHEFRRHFCNGTVGKESAEYAEQIFRTLDNNGDGVV 72

  Fly    81 EFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQM-VGQQPQSEDENTP 144
            :|.|::.|:|:..:|:..|||:|:|:|||.|.||.|||.||..|:.|:|:| |.......|..|.
Zfish    73 DFREYVTAISMLIEGSTVEKLRWSFKLYDKDKDGAITRSEMLEIMQAVYKMSVAASLTKPDPLTA 137

  Fly   145 QKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            ::..::||.::||:::..::.:||.||:..|..|.:.|
Zfish   138 EECTNRIFVRLDKDNNAIISQDEFIEGALNDEWIREML 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 15/53 (28%)
FRQ1 <69..173 CDD:444056 42/104 (40%)
si:ch211-245j22.3NP_001074270.2 None

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