DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and sowi

DIOPT Version :9

Sequence 1:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_649671.2 Gene:sowi / 40809 FlyBaseID:FBgn0037460 Length:217 Species:Drosophila melanogaster


Alignment Length:100 Identity:20/100 - (20%)
Similarity:46/100 - (46%) Gaps:7/100 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 FIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQK--R 147
            :|....:.:..::..::::||.:||....|.|.||::....:..:     ..:.|||....|  .
  Fly    99 WIHLFDLYTTNDIQVRMRFAFEVYDTKGTGVIDREQVGTACEKFF-----YGEDEDELNELKADM 158

  Fly   148 VDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            .:.:..:.|.:.||.::.|::....:..|.:|:.|
  Fly   159 TEFLMKKFDLDKDGVISYEDYSTVVEQQPILVEFL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 18/94 (19%)
sowiNP_649671.2 EF-hand_7 115..179 CDD:290234 16/68 (24%)
EFh 116..178 CDD:238008 15/66 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442290
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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