DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq1 and CG2256

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster


Alignment Length:211 Identity:54/211 - (25%)
Similarity:97/211 - (45%) Gaps:37/211 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKKSSKLKQDTIDRLTTDTYFTEKEI----RQWHKGFLKDC---PNGLLTEQGFIKIYKQFFPQ 58
            |.:.|.|:....:|.|...|.||:.|:    |.:.| .:.:|   ...|.:......|.|   |.
  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRK-LVSNCQYAAKTLASSSSSAAIAK---PH 161

  Fly    59 GDPSKFASLVF------------------RVF---DENNDG-SIEFEEFIRALSVTSKGNLDEKL 101
            ........:||                  |:|   |:.::| .:..|.::..||...:|...|:.
  Fly   162 AAVEGIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERA 226

  Fly   102 QWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQK-RVDKIFDQMDKNHDGKLTL 165
            .:.||:||::.||:||::||:.:   :...:.:|||.||.:...| .|:.:..:.|.:.|||::|
  Fly   227 AFCFRVYDLNTDGFITKDEMFTL---LRNCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSL 288

  Fly   166 EEFREGSKADPRIVQA 181
            |:|.....|:|.:::|
  Fly   289 EDFMGTVTAEPLLIEA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 11/71 (15%)
FRQ1 <69..173 CDD:444056 34/126 (27%)
CG2256NP_572437.2 PRK12309 <103..290 CDD:183426 48/193 (25%)
EF-hand_7 224..292 CDD:463900 24/70 (34%)

Return to query results.
Submit another query.