DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Rcvrn

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_033064.1 Gene:Rcvrn / 19674 MGIID:97883 Length:202 Species:Mus musculus


Alignment Length:188 Identity:83/188 - (44%)
Similarity:126/188 - (67%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG-KKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKF 64
            || .||..|.::.::.|..:|.|||:|:..|::.|||:||:|.:|.|.|..||.:|||..||..:
Mouse     1 MGNSKSGALSKEILEELQLNTKFTEEELSAWYQSFLKECPSGRITRQEFESIYSKFFPDSDPKAY 65

  Fly    65 ASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIY 129
            |..|||.||.|:||:::|:|::.||.:|:.|...:||:|||.|||||.:|.|::.|:..||.||:
Mouse    66 AQHVFRSFDANSDGTLDFKEYVIALHMTTAGKPTQKLEWAFSLYDVDGNGTISKNEVLEIVMAIF 130

  Fly   130 QMVGQQPQS-----EDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            :|:  :|:.     :|||||:||.:||:....|..|.|||.|||.||:.|:..|::.:
Mouse   131 KMI--KPEDVKLLPDDENTPEKRAEKIWAFFGKKEDDKLTEEEFIEGTLANKEILRLI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 23/49 (47%)
FRQ1 <69..173 CDD:444056 51/108 (47%)
RcvrnNP_033064.1 FRQ1 41..175 CDD:444056 62/135 (46%)
Interaction with GRK1. /evidence=ECO:0000250|UniProtKB:P21457 189..192
Blue background indicates that the domain is not in the aligned region.

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