DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and Rcvrn

DIOPT Version :9

Sequence 1:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_033064.1 Gene:Rcvrn / 19674 MGIID:97883 Length:202 Species:Mus musculus


Alignment Length:188 Identity:83/188 - (44%)
Similarity:126/188 - (67%) Gaps:8/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG-KKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKF 64
            || .||..|.::.::.|..:|.|||:|:..|::.|||:||:|.:|.|.|..||.:|||..||..:
Mouse     1 MGNSKSGALSKEILEELQLNTKFTEEELSAWYQSFLKECPSGRITRQEFESIYSKFFPDSDPKAY 65

  Fly    65 ASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIY 129
            |..|||.||.|:||:::|:|::.||.:|:.|...:||:|||.|||||.:|.|::.|:..||.||:
Mouse    66 AQHVFRSFDANSDGTLDFKEYVIALHMTTAGKPTQKLEWAFSLYDVDGNGTISKNEVLEIVMAIF 130

  Fly   130 QMVGQQPQS-----EDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQAL 182
            :|:  :|:.     :|||||:||.:||:....|..|.|||.|||.||:.|:..|::.:
Mouse   131 KMI--KPEDVKLLPDDENTPEKRAEKIWAFFGKKEDDKLTEEEFIEGTLANKEILRLI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 77/173 (45%)
RcvrnNP_033064.1 FRQ1 14..182 CDD:227455 77/169 (46%)
EFh <37..90 CDD:298682 25/52 (48%)
EFh 65..127 CDD:238008 29/61 (48%)
EFh 101..175 CDD:238008 36/75 (48%)
Interaction with GRK1. /evidence=ECO:0000250|UniProtKB:P21457 189..192
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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