Protein Alignment Frq1 and ncs-3

DIOPT Version :9

• Sequence 1: NP_001033853.1
• Gene: Frq1 / 32797
• FlyBaseID: FBgn0030897
• Length: 187
• Species: Drosophila melanogaster
• Sequence 2: NP_508201.2
• Gene: ncs-3 / 186953
• WormBaseID: WBGene00003565
• Length: 199
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 117/195 - (60%)
• Similarity: 149/195 - (76%)
• Gaps: 11/195 - (5%)

  Fly     1 MGKKSSKL--KQDTIDRLTTD--------TYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQF 55
            |||..||:  |:....:|||:        ||||:||:::|:|.|::|||:|.|..:.|..|||||
 Worm     1 MGKSQSKVQTKKKANKKLTTEEVQTLEQVTYFTKKELKKWYKDFVRDCPSGELKMEEFQGIYKQF 65

  Fly    56 FPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREE 120
            ||.|||||||:.||.|||:|:||.|.|.|||.|||:||:|.|||||.|||.|||||.||:||::|
 Worm    66 FPNGDPSKFAAFVFNVFDDNHDGHISFSEFIAALSITSRGTLDEKLDWAFSLYDVDKDGFITKDE 130

  Fly   121 MYNIVDAIYQMVGQQPQ-SEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            |.:||||||.|:|...: .:||:||||||:|||..||:|.||:||.|||:|||||||.|||||::
 Worm   131 MADIVDAIYSMIGNMLELPKDEDTPQKRVEKIFTNMDRNLDGQLTREEFKEGSKADPWIVQALTM 195

  Fly   185  184
             Worm   196  195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Frq1	NP_001033853.1	FRQ1	9..178	CDD:227455	107/177 (60%)
ncs-3	NP_508201.2	FRQ1	19..187	CDD:227455	103/167 (62%)
		EFh	77..135	CDD:238008	38/57 (67%)
		EFh	110..182	CDD:238008	45/71 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0044
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG28990
OrthoDB	1	1.010	-	-		D1369072at2759
OrthoFinder	1	1.000	-	-		FOG0000038
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100764
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X31
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.690