DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and kcnip4a

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_068078886.1 Gene:kcnip4a / 100536963 ZFINID:ZDB-GENE-131003-3 Length:253 Species:Danio rerio


Alignment Length:178 Identity:74/178 - (41%)
Similarity:124/178 - (69%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFD 73
            :.:.:::|...|.|:.||::..::||..:||:|::.|..|.:||.|||||||.|.:|..:|..||
Zfish    72 RPEALEQLEAQTRFSRKELQILYRGFKNECPSGVVNEDTFKEIYAQFFPQGDASTYAHFLFNAFD 136

  Fly    74 ENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQ--QP 136
            .:::||:.||:|:..||:..:|::.|||.|||.|||::.|||||:|||.:|:.:||.|:|:  .|
Zfish   137 TDHNGSVSFEDFVMGLSILLRGSVQEKLNWAFNLYDINKDGYITKEEMLDIIKSIYDMMGKCTYP 201

  Fly   137 QSEDENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            ..::| ||::.|:..|.:||||.||.:|::||.:..:.|..|::::.|
Zfish   202 ILKEE-TPRQHVEIFFQKMDKNRDGVVTIDEFIDCCQNDENIMRSMQL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 23/49 (47%)
FRQ1 <69..173 CDD:444056 48/105 (46%)
kcnip4aXP_068078886.1 FRQ1 103..232 CDD:444056 60/129 (47%)

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