DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and kcnip1

DIOPT Version :9

Sequence 1:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002937770.1 Gene:kcnip1 / 100497014 XenbaseID:XB-GENE-973728 Length:230 Species:Xenopus tropicalis


Alignment Length:193 Identity:77/193 - (39%)
Similarity:120/193 - (62%) Gaps:12/193 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KSSKLKQDT-----------IDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFP 57
            ||.|::.:.           :::|...|.|.::|::..::||..:||:|::.|..|..||.||||
 Frog    33 KSDKVEDELEMTTVCYRPEGLEQLEAQTNFNKRELQVLYRGFKNECPSGVVNEDTFKLIYSQFFP 97

  Fly    58 QGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMY 122
            .||.|.:|..:|..||....||::||:|:.||||..:|::.|||:|.|.|||::.||.|.:|||.
 Frog    98 HGDASMYAHYLFNAFDAAQSGSVKFEDFVAALSVLLRGSIHEKLRWTFNLYDINKDGNINKEEMM 162

  Fly   123 NIVDAIYQMVGQQPQSE-DENTPQKRVDKIFDQMDKNHDGKLTLEEFREGSKADPRIVQALSL 184
            :||.|||.|:|:..... .|:.|::.|:..|.:||||.||.:||:||.|..:.|..|:::|.|
 Frog   163 DIVKAIYDMMGKYTYPVLKEDAPKQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 71/180 (39%)
kcnip1XP_002937770.1 FRQ1 53..219 CDD:227455 71/165 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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