DRSC/TRiP Functional Genomics Resources

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Protein Alignment Frq1 and guca1ab.2

DIOPT Version :10

Sequence 1:NP_573271.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_002666176.1 Gene:guca1ab.2 / 100330921 ZFINID:ZDB-GENE-091204-414 Length:192 Species:Danio rerio


Alignment Length:168 Identity:67/168 - (39%)
Similarity:101/168 - (60%) Gaps:18/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPS----KFASLVFRVFDENNDGSIEFEEFI 86
            |..||::.|:.:||:|.||...|    |:||...:.|    ::...:|:.||.|:||.|:|.|::
Zfish    16 ESHQWYRKFMTECPSGQLTFYEF----KKFFGLKNLSEKSNEYVMTMFQTFDMNDDGCIDFMEYV 76

  Fly    87 RALSVTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVG-QQPQSEDENTPQKRVDK 150
            .|||:..||.:.:||:|.|:|||||..|.|.|||:..||.||..:.| :|..|.:|.|     :.
Zfish    77 AALSLILKGGVQQKLRWYFKLYDVDGSGCIDREELLLIVKAIRAINGVEQEVSAEEFT-----NM 136

  Fly   151 IFDQMDKNHDGKLTLEEFREGSKAD----PRIVQALSL 184
            :|:::|.|.||.||::||.||.:||    ..:.|:|.|
Zfish   137 VFEKIDLNADGVLTMDEFMEGIQADEYLSTMLTQSLDL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_573271.1 EFh 39..89 CDD:415501 18/53 (34%)
FRQ1 <69..173 CDD:444056 48/104 (46%)
guca1ab.2XP_002666176.1 FRQ1 30..159 CDD:444056 56/137 (41%)

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